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3EZS

Crystal structure of aminotransferase AspB (NP_207418.1) from HELICOBACTER PYLORI 26695 at 2.19 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0009058biological_processbiosynthetic process
A0030170molecular_functionpyridoxal phosphate binding
B0009058biological_processbiosynthetic process
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 376
ChainResidue
ATYR54
BSER90
BARG91
BSER227
BSER229
BARG238

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 A 376
ChainResidue
ASER229
AARG238
AHOH578
AHOH716
BTYR54
ASER90
AARG91
ASER227

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 377
ChainResidue
AASN160
ASER161
AARG168
ALEU170

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 377
ChainResidue
BLYS180
BASP356

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 378
ChainResidue
BMSE1
BTHR2

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 379
ChainResidue
BALA129
BSER131

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 378
ChainResidue
ALEU133
ASER145
AGLU150
AHOH531

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 380
ChainResidue
BPRO144
BASN160
BSER161
BARG168

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 381
ChainResidue
BTHR169
BLEU170
BSER171
BTYR307

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 379
ChainResidue
ATYR117
AASN160
AASN164
AASP192
ATYR195
AHOH381

Functional Information from PROSITE/UniProt
site_idPS01037
Number of Residues18
DetailsSBP_BACTERIAL_1 Bacterial extracellular solute-binding proteins, family 1 signature. GADyVrlALVYDtplLeK
ChainResidueDetails
AGLY345-LYS362

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP192
ATYR117
ALYS230

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BASP192
BTYR117
BLYS230

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP192
APHE116
ALYS230

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BASP192
BPHE116
BLYS230

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP192
ATYR117

site_idCSA6
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BASP192
BTYR117

site_idCSA7
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
ALYS56

site_idCSA8
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BLYS56

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PDB entries from 2024-10-30

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