3EZS
Crystal structure of aminotransferase AspB (NP_207418.1) from HELICOBACTER PYLORI 26695 at 2.19 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-08-11 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97932 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 92.648, 106.249, 80.201 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.281 - 2.190 |
R-factor | 0.161 |
Rwork | 0.159 |
R-free | 0.21500 |
Structure solution method | MAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.519 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.281 | 44.281 | 2.270 |
High resolution limit [Å] | 2.190 | 4.700 | 2.190 |
Rmerge | 0.112 | 0.041 | 0.612 |
Number of reflections | 40833 | 4373 | 3568 |
<I/σ(I)> | 12.8 | 32.4 | 2.29 |
Completeness [%] | 98.3 | 98.1 | 85.8 |
Redundancy | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 15.0000% Glycerol, 8.5000% iso-Propanol, 17.0000% PEG-4000, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |