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3EXS

Crystal structure of KGPDC from Streptococcus mutans in complex with D-R5P

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006730biological_processone-carbon metabolic process
A0016829molecular_functionlyase activity
A0019854biological_processL-ascorbic acid catabolic process
A0033982molecular_function3-dehydro-L-gulonate-6-phosphate decarboxylase activity
A0046872molecular_functionmetal ion binding
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006730biological_processone-carbon metabolic process
B0016829molecular_functionlyase activity
B0019854biological_processL-ascorbic acid catabolic process
B0033982molecular_function3-dehydro-L-gulonate-6-phosphate decarboxylase activity
B0046872molecular_functionmetal ion binding
C0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
C0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
C0006730biological_processone-carbon metabolic process
C0016829molecular_functionlyase activity
C0019854biological_processL-ascorbic acid catabolic process
C0033982molecular_function3-dehydro-L-gulonate-6-phosphate decarboxylase activity
C0046872molecular_functionmetal ion binding
D0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
D0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
D0006730biological_processone-carbon metabolic process
D0016829molecular_functionlyase activity
D0019854biological_processL-ascorbic acid catabolic process
D0033982molecular_function3-dehydro-L-gulonate-6-phosphate decarboxylase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE 5RP A 501
ChainResidue
AALA11
AHOH228
AHOH262
CASP69
AASP13
ALYS66
ATYR119
ATHR174
AGLY176
AGLY196
AARG197
AHOH225

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 5RP D 502
ChainResidue
BASP69
DALA11
DASP13
DLYS66
DTYR119
DHIS141
DTHR174
DGLY176
DGLY196
DARG197
DHOH222
DHOH224
DHOH226
DHOH262
DHOH289

218853

PDB entries from 2024-04-24

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