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3ERR

Microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-tRNA synthetase

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004828molecular_functionserine-tRNA ligase activity
A0005524molecular_functionATP binding
A0006418biological_processtRNA aminoacylation for protein translation
A0006434biological_processseryl-tRNA aminoacylation
B0000166molecular_functionnucleotide binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004828molecular_functionserine-tRNA ligase activity
B0005524molecular_functionATP binding
B0006418biological_processtRNA aminoacylation for protein translation
B0006434biological_processseryl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE AMP A1507
ChainResidue
AARG256
AHIS347
ASER348
ATHR380
AHOH3431
AHOH3450
AHOH3453
AGLU258
AMET270
AARG271
AVAL272
APHE275
ALYS277
AGLU345
ATHR346

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE AMP B1508
ChainResidue
BARG256
BGLU258
BMET270
BARG271
BVAL272
BPHE275
BLYS277
BGLU345
BTHR346
BHIS347
BSER348
BTHR380
BARG386
BHOH3457
BHOH3458
BHOH3471
BHOH3472
BHOH3474

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00176
ChainResidueDetails
ATHR225
BGLU279
BGLU345
BTHR380
AARG256
AVAL272
AGLU279
AGLU345
ATHR380
BTHR225
BARG256
BVAL272

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 884
ChainResidueDetails
AARG256electrostatic stabiliser
AARG271electrostatic stabiliser
AGLU345metal ligand
ASER348metal ligand
AARG386electrostatic stabiliser

site_idMCSA2
Number of Residues5
DetailsM-CSA 884
ChainResidueDetails
BARG256electrostatic stabiliser
BARG271electrostatic stabiliser
BGLU345metal ligand
BSER348metal ligand
BARG386electrostatic stabiliser

218853

PDB entries from 2024-04-24

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