Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3EF5

Structure of the RNA pyrophosphohydrolase BdRppH in complex with dGTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005525molecular_functionGTP binding
A0006260biological_processDNA replication
A0006281biological_processDNA repair
A0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0035539molecular_function8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
A0042802molecular_functionidentical protein binding
A0044715molecular_function8-oxo-dGDP phosphatase activity
A0044716molecular_function8-oxo-GDP phosphatase activity
A0046872molecular_functionmetal ion binding
B0005525molecular_functionGTP binding
B0006260biological_processDNA replication
B0006281biological_processDNA repair
B0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
B0016787molecular_functionhydrolase activity
B0035539molecular_function8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
B0042802molecular_functionidentical protein binding
B0044715molecular_function8-oxo-dGDP phosphatase activity
B0044716molecular_function8-oxo-GDP phosphatase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DGT A3800
ChainResidue
AVAL24
AASN136
AHOH3818
AHOH3819
AARG40
APHE52
AGLY54
AGLY55
ALYS56
AILE97
AILE99
APRO133

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DGT B3801
ChainResidue
BVAL24
BARG40
BGLU51
BPHE52
BGLY54
BGLY55
BLYS56
BILE97
BILE99
BPRO133
BASN136
BHOH176

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GkiengEtpeeALaRELnEElG
ChainResidueDetails
AGLY55-GLY76

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon