3EEU
Structure of the RNA pyrophosphohydrolase BdRppH in complex with Holmium
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006281 | biological_process | DNA repair |
| A | 0008413 | molecular_function | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0035539 | molecular_function | 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0044715 | molecular_function | 8-oxo-dGDP phosphatase activity |
| A | 0044716 | molecular_function | 8-oxo-GDP phosphatase activity |
| B | 0006281 | biological_process | DNA repair |
| B | 0008413 | molecular_function | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0035539 | molecular_function | 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity |
| B | 0042802 | molecular_function | identical protein binding |
| B | 0044715 | molecular_function | 8-oxo-dGDP phosphatase activity |
| B | 0044716 | molecular_function | 8-oxo-GDP phosphatase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE HO A 154 |
| Chain | Residue |
| A | GLU70 |
| A | GLU73 |
| A | HOH1309 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACT A 1307 |
| Chain | Residue |
| A | LYS31 |
| A | LYS34 |
| A | TRP121 |
| A | HIS129 |
| A | HOH170 |
| A | HOH1333 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACT A 1308 |
| Chain | Residue |
| A | ARG30 |
| A | ASP32 |
| A | HOH213 |
| A | HOH1318 |
| A | HOH1329 |
| B | LYS128 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL B 154 |
| Chain | Residue |
| B | GLU51 |
| B | PHE52 |
| B | ASN136 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE HO B 155 |
| Chain | Residue |
| B | GLU70 |
| B | GLU73 |
| B | HOH156 |
| B | HOH157 |
| B | HOH158 |
Functional Information from PROSITE/UniProt
| site_id | PS00893 |
| Number of Residues | 22 |
| Details | NUDIX_BOX Nudix box signature. GkiengEtpeeALaRELnEElG |
| Chain | Residue | Details |
| A | GLY55-GLY76 |
