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3E2V

Crystal structure of an uncharacterized amidohydrolase from Saccharomyces cerevisiae

Functional Information from GO Data
ChainGOidnamespacecontents
A0004527molecular_functionexonuclease activity
A0005829cellular_componentcytosol
A0006259biological_processDNA metabolic process
A0008296molecular_function3'-5'-DNA exonuclease activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0046872molecular_functionmetal ion binding
B0004527molecular_functionexonuclease activity
B0005829cellular_componentcytosol
B0006259biological_processDNA metabolic process
B0008296molecular_function3'-5'-DNA exonuclease activity
B0016788molecular_functionhydrolase activity, acting on ester bonds
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1
ChainResidue
ACYS213
ASER260
ASER261
AGLY264
APHE265
ATYR266
AHOH488
AHOH627

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 426
ChainResidue
ASER359
AMET376
AVAL377
AGLY379
AARG380
AASN385
AHOH509
AHOH539
AGLU332

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 427
ChainResidue
AHIS277
AASP327
AHOH454
AHOH541
AHOH623
AHOH631

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 1
ChainResidue
BCYS213
BSER260
BSER261
BGLY264
BPHE265
BTYR266
BHOH487
BHOH718

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 426
ChainResidue
BHIS277
BSER278
BASP327
BHOH435
BHOH599
BHOH603
BHOH777

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 427
ChainResidue
BGLU332
BSER359
BMET376
BVAL377
BGLY379
BARG380
BASN385
BHOH510
BHOH611

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 428
ChainResidue
BHOH530
BHOH604
BHOH771
BHOH772
BHOH773
BHOH774

Functional Information from PROSITE/UniProt
site_idPS01090
Number of Residues11
DetailsTATD_2 TatD deoxyribonuclease family signature 2. PLfLHmRsAcD
ChainResidueDetails
APRO222-ASP232

site_idPS01091
Number of Residues17
DetailsTATD_3 TatD deoxyribonuclease family signature 3. VVkqIPterLLLETDaP
ChainResidueDetails
AVAL313-PRO329

226707

PDB entries from 2024-10-30

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