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3DYH

T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-721

Functional Information from GO Data
ChainGOidnamespacecontents
A0004161molecular_functiondimethylallyltranstransferase activity
A0004337molecular_functiongeranyltranstransferase activity
A0004659molecular_functionprenyltransferase activity
A0005737cellular_componentcytoplasm
A0008299biological_processisoprenoid biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0045337biological_processfarnesyl diphosphate biosynthetic process
A0046872molecular_functionmetal ion binding
B0004161molecular_functiondimethylallyltranstransferase activity
B0004337molecular_functiongeranyltranstransferase activity
B0004659molecular_functionprenyltransferase activity
B0005737cellular_componentcytoplasm
B0008299biological_processisoprenoid biosynthetic process
B0016740molecular_functiontransferase activity
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0045337biological_processfarnesyl diphosphate biosynthetic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 3002
ChainResidue
AASP103
AASP107
AHOH3022

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 3003
ChainResidue
AASP255
AHOH3005
AHOH3026
AHOH3048

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 3004
ChainResidue
AHOH3006
AHOH3017
AHOH3102
AASP103
AASP107

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 4002
ChainResidue
BASP103
BASP107
BHOH4006
BHOH4008

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 4003
ChainResidue
BASP255
BHOH4039
BHOH4041
BHOH4179

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 4004
ChainResidue
BASP103
BASP107
BHOH4020
BHOH4021
BHOH4117

site_idAC7
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 721 A 3001
ChainResidue
ATYR99
AASP103
AASP107
AARG112
ATHR168
AGLN172
ALYS212
ATHR213
AASP255
ALYS269
AHOH3005
AHOH3006
AHOH3017
AHOH3022
AHOH3024
AHOH3026
AHOH3047
AHOH3048
BASN131
BLEU134

site_idAC8
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 721 B 4001
ChainResidue
AASN131
ALEU134
BTYR99
BASP103
BASP107
BARG112
BTHR168
BGLN172
BLYS212
BTHR213
BASP255
BLYS269
BHOH4006
BHOH4008
BHOH4020
BHOH4021
BHOH4032
BHOH4041
BHOH4044
BHOH4179

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGeyFQVqDDVmD
ChainResidueDetails
AMET247-ASP259

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVeDDim..DnsvtRRG
ChainResidueDetails
ALEU100-GLY114

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
APHE251
AARG112

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1fps
ChainResidueDetails
BPHE251
BARG112

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PDB entries from 2024-08-21

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