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3DJL

Crystal structure of alkylation response protein E. coli AidB

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003995molecular_functionacyl-CoA dehydrogenase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0006974biological_processDNA damage response
A0008470molecular_functionisovaleryl-CoA dehydrogenase activity
A0016491molecular_functionoxidoreductase activity
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
A0042802molecular_functionidentical protein binding
A0043565molecular_functionsequence-specific DNA binding
A0045892biological_processnegative regulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 601
ChainResidue
AGLN333
AHOH701
AHOH711
AHOH716
AHOH1060
AHOH1061
AHOH1062

site_idAC2
Number of Residues34
DetailsBINDING SITE FOR RESIDUE FAD A 602
ChainResidue
ATHR185
AGLY190
ASER191
APHE216
ASER218
ALYS260
AARG324
AVAL326
APHE327
ALEU331
AGLN334
AMET337
AGLU398
AVAL399
AGLY401
AGLY402
AVAL420
AILE423
ATRP424
AGLU425
AGLY426
ASER427
AASN429
AHOH709
AHOH710
AHOH722
AHOH723
AHOH726
AHOH728
AHOH740
AHOH756
AHOH831
AMET182
AMET184

Functional Information from PROSITE/UniProt
site_idPS00072
Number of Residues13
DetailsACYL_COA_DH_1 Acyl-CoA dehydrogenases signature 1. GMTEkqGGSDvmS
ChainResidueDetails
AGLY183-SER195

site_idPS00073
Number of Residues20
DetailsACYL_COA_DH_2 Acyl-CoA dehydrogenases signature 2. EvLGGiGYceEselpRlyrE
ChainResidueDetails
AGLU398-GLU417

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsBINDING: BINDING => ECO:0000269|PubMed:18829440
ChainResidueDetails
APHE216
ASER218
AILE423
AASN429
AMET182
ATHR185
ASER191

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PDB entries from 2024-06-12

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