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3DC8

Crystal structure of dihydropyrimidinase from Sinorhizobium meliloti

Functional Information from GO Data
ChainGOidnamespacecontents
A0004157molecular_functiondihydropyrimidinase activity
A0005737cellular_componentcytoplasm
A0016787molecular_functionhydrolase activity
A0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
A0046872molecular_functionmetal ion binding
B0004157molecular_functiondihydropyrimidinase activity
B0005737cellular_componentcytoplasm
B0016787molecular_functionhydrolase activity
B0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 501
ChainResidue
AHIS180
AHIS236

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 502
ChainResidue
AHIS56
AHIS58
AASP313

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B 501
ChainResidue
BHIS180
BHIS236

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 502
ChainResidue
BASP313
BHIS56
BHIS58

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT B 503
ChainResidue
BTYR47
BMET358

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT A 503
ChainResidue
AASN144
AGLY174
AALA175
ALEU176
AILE372
APRO454
APRO456
ASER459

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 504
ChainResidue
AASP296
ATRP299
AARG355
BGLY253

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 505
ChainResidue
AALA303
AGLY354
AARG355
BGLY253
BARG255
BALA461
BLEU462

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 506
ChainResidue
AGLY253
AARG255
AALA461
ALEU462
ATRP465
BALA303
BGLY354
BARG355

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 504
ChainResidue
ALYS252
AGLY253
BASP296
BTRP299
BALA300
BARG355

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1j79
ChainResidueDetails
AASP313

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1j79
ChainResidueDetails
BASP313

224201

PDB entries from 2024-08-28

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