3D2Z

Complex of the N-acetylmuramyl-L-alanine amidase AmiD from E.coli with the product L-Ala-D-gamma-Glu-L-Lys

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0008270	molecular_function	zinc ion binding
A	0008745	molecular_function	N-acetylmuramoyl-L-alanine amidase activity
A	0009253	biological_process	peptidoglycan catabolic process
A	0009254	biological_process	peptidoglycan turnover
A	0009279	cellular_component	cell outer membrane
A	0009392	molecular_function	N-acetyl-anhydromuramoyl-L-alanine amidase activity
A	0016787	molecular_function	hydrolase activity
A	0019867	cellular_component	outer membrane
A	0046872	molecular_function	metal ion binding
A	0071555	biological_process	cell wall organization

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ZN A 262

Chain	Residue
A	HIS35
A	HIS151
A	ASP161

---

site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE ZN A 263

Chain	Residue
A	ASP17
A	ARG20

---

site_id	AC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN A 262

Chain	Residue
A	HIS35
A	HIS151
A	ASP161
A	HOH322

---

site_id	AC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ZN A 263

Chain	Residue
A	ASP17
A	ARG20
A	HOH337

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	137
Details	Domain: {"description":"N-acetylmuramoyl-L-alanine amidase","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"20036252","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"PubMed","id":"20036252","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Site: {"description":"Transition state stabilizer","evidences":[{"source":"PubMed","id":"20036252","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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