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3CWD

Molecular recognition of nitro-fatty acids by PPAR gamma

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE LNA A 1
ChainResidue
ACYS285
AGLN286
AARG288
ASER289
AILE326
AHIS449
ATYR473

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE LNB A 478
ChainResidue
AARG288
ASER289
ATYR327
ALEU340
AILE341
AMET364
AHIS449
ATYR473
ACYS285
AGLN286

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE LNA B 1
ChainResidue
BCYS285
BARG288
BSER289
BHIS323
BILE326
BTYR327
BHIS449
BTYR473

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE LNB B 478
ChainResidue
BCYS285
BARG288
BSER289
BHIS323
BTYR327
BLEU340
BILE341
BMET364
BHIS449
BTYR473

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsMotif: {"description":"9aaTAD","evidences":[{"source":"PubMed","id":"30468856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9744270","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PRG","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36737649","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsMotif: {"description":"LXXLL motif 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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