Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006281 | biological_process | DNA repair |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0034061 | molecular_function | DNA polymerase activity |
B | 0003677 | molecular_function | DNA binding |
B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
B | 0006281 | biological_process | DNA repair |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0034061 | molecular_function | DNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 602 |
Chain | Residue |
A | ASP427 |
A | ASP429 |
A | D3T576 |
A | NA803 |
A | HOH976 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 803 |
Chain | Residue |
A | MG602 |
P | HOH671 |
A | ASP427 |
A | ASP429 |
A | ASP490 |
A | D3T576 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 804 |
Chain | Residue |
A | SER339 |
A | ILE341 |
A | ALA344 |
P | DA5 |
P | HOH170 |
P | HOH311 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 805 |
Chain | Residue |
A | CYS300 |
A | ILE302 |
A | PRO303 |
A | ILE305 |
B | HOH953 |
D | DC3 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO T 2801 |
Chain | Residue |
D | DG1 |
D | DC2 |
T | DG2 |
T | DG3 |
T | HOH619 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA P 807 |
Chain | Residue |
A | GLN372 |
A | HOH866 |
A | HOH934 |
P | DG3 |
P | DT4 |
P | HOH342 |
site_id | AC7 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE D3T B 577 |
Chain | Residue |
B | ARG386 |
B | GLY416 |
B | SER417 |
B | ARG420 |
B | GLY426 |
B | ASP427 |
B | ASP429 |
B | TYR505 |
B | PHE506 |
B | GLY508 |
B | ALA510 |
B | ASN513 |
B | MG601 |
B | NA802 |
B | HOH840 |
B | HOH984 |
B | HOH1008 |
B | HOH1067 |
B | HOH1098 |
Q | 2DT6 |
Q | HOH16 |
U | DA5 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 601 |
Chain | Residue |
B | ASP427 |
B | ASP429 |
B | D3T577 |
B | NA802 |
B | HOH1067 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA B 801 |
Chain | Residue |
B | SER339 |
B | ILE341 |
B | ALA344 |
Q | DA5 |
Q | HOH7 |
Q | HOH12 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA B 802 |
Chain | Residue |
B | ASP427 |
B | ASP429 |
B | ASP490 |
B | D3T577 |
B | MG601 |
Q | HOH16 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA B 806 |
Chain | Residue |
A | LYS307 |
B | CYS300 |
B | ILE302 |
B | ILE305 |
E | DC3 |
site_id | BC3 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE D3T A 576 |
Chain | Residue |
T | DA5 |
A | ARG386 |
A | GLY416 |
A | SER417 |
A | ARG420 |
A | GLY426 |
A | ASP427 |
A | ASP429 |
A | TYR505 |
A | PHE506 |
A | GLY508 |
A | ALA510 |
A | ASN513 |
A | MG602 |
A | NA803 |
A | HOH976 |
A | HOH1125 |
A | HOH1126 |
A | HOH1128 |
A | HOH1129 |
P | 2DT6 |
P | HOH671 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA B 808 |
Chain | Residue |
B | GLU396 |
B | GLN400 |
B | CYS412 |
B | HOH947 |
B | HOH949 |
B | HOH1076 |
Functional Information from PROSITE/UniProt
site_id | PS00522 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_X DNA polymerase family X signature. GSYrRGkatCgDVDVLIthP |
Chain | Residue | Details |
A | GLY416-PRO435 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | LYS312 | |
B | LYS312 | |
Chain | Residue | Details |
A | ARG386 | |
A | SER417 | |
A | GLY426 | |
A | ASN513 | |
B | ARG386 | |
B | SER417 | |
B | GLY426 | |
B | ASN513 | |
Chain | Residue | Details |
A | ASP427 | |
A | ASP429 | |
A | ASP490 | |
B | ASP427 | |
B | ASP429 | |
B | ASP490 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1jms |
Chain | Residue | Details |
A | ASP490 | |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1jms |
Chain | Residue | Details |
B | ASP490 | |