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3BT7

Structure of E. coli 5-Methyluridine Methyltransferase TrmA in complex with 19 nucleotide T-arm analogue

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0005829cellular_componentcytosol
A0006396biological_processRNA processing
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0008173molecular_functionRNA methyltransferase activity
A0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
A0009451biological_processRNA modification
A0016740molecular_functiontransferase activity
A0019843molecular_functionrRNA binding
A0030488biological_processtRNA methylation
A0030697molecular_functiontRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent
A0032259biological_processmethylation
A0061818biological_processtRNA folding
B0000049molecular_functiontRNA binding
B0005829cellular_componentcytosol
B0006396biological_processRNA processing
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0008173molecular_functionRNA methyltransferase activity
B0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
B0009451biological_processRNA modification
B0016740molecular_functiontransferase activity
B0019843molecular_functionrRNA binding
B0030488biological_processtRNA methylation
B0030697molecular_functiontRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent
B0032259biological_processmethylation
B0061818biological_processtRNA folding
Functional Information from PROSITE/UniProt
site_idPS01230
Number of Residues30
DetailsTRMA_1 RNA methyltransferase trmA family signature 1. DPPRsGldsetekmvqaypr.....ILYiSCNpeT
ChainResidueDetails
AASP299-THR328

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"HAMAP-Rule","id":"MF_01011","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18451029","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01011","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18451029","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01011","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsSite: {"description":"Interaction with RNA"}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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