Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3BNF

W. succinogenes NrfA Sulfite Complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0009061biological_processanaerobic respiration
A0016491molecular_functionoxidoreductase activity
A0019645biological_processanaerobic electron transport chain
A0020037molecular_functionheme binding
A0030288cellular_componentouter membrane-bounded periplasmic space
A0042128biological_processnitrate assimilation
A0042279molecular_functionnitrite reductase (cytochrome, ammonia-forming) activity
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 513
ChainResidue
AGLU217
ATYR218
ALYS274
AGLN276
AHOH590
AHOH706

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO3 A 1
ChainResidue
AHIS277
AHOH559
AHOH1042
APHE92
AARG114
ATYR218

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE Y1 A 2
ChainResidue
AGLU52
AASP444
AHOH659
AHOH776
AHOH777
AHOH778
AHOH781

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE Y1 A 3
ChainResidue
APRO99
AHOH784
AHOH1069

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE Y1 A 4
ChainResidue
AGLU408

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 5
ChainResidue
AGLY286
AILE287
APRO407
AGLU408
AHOH827

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT A 6
ChainResidue
AGLY43
AILE44
AGLU45
ATYR56
AHOH659
AHOH776
AHOH781
AHOH813

site_idAC8
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM A 508
ChainResidue
ATYR96
AASN97
AASP108
AASN109
ATHR112
AARG114
ATHR115
ALEU126
ACYS130
ACYS133
ALYS134
ACYS214
AHIS215
ATYR218
AHIS277
AALA398
AHIS400
AHOH538
AHOH541
AHOH559
AHOH561
AHOH565
AHOH607

site_idAC9
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM A 509
ChainResidue
ATYR57
AGLN60
ATRP64
AGLY167
ACYS168
ACYS171
AHIS172
ALEU179
AHIS203
AARG207
AMET300
ATYR302
ATYR310
ASER311
AHIS313
AHOH809
AHOH823

site_idBC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM A 510
ChainResidue
ASER70
APRO99
AARG100
AGLY101
AHIS102
ATYR104
AALA105
AASP108
ACYS133
ALYS134
AILE166
ACYS211
ACYS214
AHIS215
AHIS299
AGLY316
AHOH536
AHOH537

site_idBC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM A 511
ChainResidue
ACYS295
ACYS298
AHIS299
AASN317
APRO318
AHIS400
AGLY401
APHE404
AHIS405
AHOH1069
AHOH1082
APRO99
AHIS215
ATYR283
AHIS288
ASER294

site_idBC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM A 512
ChainResidue
AILE287
AHIS288
ALYS291
APRO318
ASER325
ACYS326
ACYS329
AHIS330
ALYS344
APHE404
AGLU408
AHOH718
AHOH894

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues9
DetailsBinding site: {"description":"axial binding residue","evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues10
DetailsBinding site: {"description":"covalent","evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000305"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon