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3BEM

Crystal structure of putative nitroreductase ydfN (2632848) from Bacillus subtilis at 1.65 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0009636biological_processresponse to toxic substance
A0016491molecular_functionoxidoreductase activity
B0005737cellular_componentcytoplasm
B0009636biological_processresponse to toxic substance
B0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NI A 400
ChainResidue
AHIS6
AGLU10
BHIS0
BHOH450

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT A 401
ChainResidue
ATYR94
BFMN300

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE FMN A 300
ChainResidue
AGLN68
ALYS70
ACYS154
APRO155
AMSE156
AILE157
AGLY158
AARG193
AARG196
AHOH468
AHOH472
BPRO39
BSER40
BALA41
BASN43
BLEU137
AARG11
AARG12
ASER13

site_idAC4
Number of Residues21
DetailsBINDING SITE FOR RESIDUE FMN B 300
ChainResidue
APRO39
ASER40
AALA41
AASN43
AASN134
ALEU137
AACT401
AHOH488
BARG11
BARG12
BSER13
BGLN68
BLYS70
BCYS154
BPRO155
BMSE156
BILE157
BGLY158
BARG193
BARG196
BHOH335

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PGO B 301
ChainResidue
BPRO22
BILE23
BLEU53
BSER75

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PGO A 402
ChainResidue
ALEU18
ASER19
AGLY20
AHIS21
ASER73
ASER75

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"DEC-2007","submissionDatabase":"PDB data bank","title":"Crystal structure of putative nitroreductase ydfN (2632848) from Bacillus subtilis at 1.65 A resolution.","authoringGroup":["Joint center for structural genomics (JCSG)"]}}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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