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3BBP

Rab6-GTP:GCC185 Rab binding domain complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000139cellular_componentGolgi membrane
A0002080cellular_componentacrosomal membrane
A0003924molecular_functionGTPase activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0005789cellular_componentendoplasmic reticulum membrane
A0005794cellular_componentGolgi apparatus
A0005802cellular_componenttrans-Golgi network
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006886biological_processintracellular protein transport
A0006890biological_processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
A0006891biological_processintra-Golgi vesicle-mediated transport
A0012505cellular_componentendomembrane system
A0015031biological_processprotein transport
A0016020cellular_componentmembrane
A0016192biological_processvesicle-mediated transport
A0018125biological_processpeptidyl-cysteine methylation
A0019882biological_processantigen processing and presentation
A0019904molecular_functionprotein domain specific binding
A0030667cellular_componentsecretory granule membrane
A0031175biological_processneuron projection development
A0031410cellular_componentcytoplasmic vesicle
A0031489molecular_functionmyosin V binding
A0032588cellular_componenttrans-Golgi network membrane
A0034067biological_processprotein localization to Golgi apparatus
A0034498biological_processearly endosome to Golgi transport
A0042147biological_processretrograde transport, endosome to Golgi
A0070062cellular_componentextracellular exosome
A0070381cellular_componentendosome to plasma membrane transport vesicle
A0072385biological_processminus-end-directed organelle transport along microtubule
A1903292biological_processprotein localization to Golgi membrane
B0000139cellular_componentGolgi membrane
B0002080cellular_componentacrosomal membrane
B0003924molecular_functionGTPase activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005789cellular_componentendoplasmic reticulum membrane
B0005794cellular_componentGolgi apparatus
B0005802cellular_componenttrans-Golgi network
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006886biological_processintracellular protein transport
B0006890biological_processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
B0006891biological_processintra-Golgi vesicle-mediated transport
B0012505cellular_componentendomembrane system
B0015031biological_processprotein transport
B0016020cellular_componentmembrane
B0016192biological_processvesicle-mediated transport
B0018125biological_processpeptidyl-cysteine methylation
B0019882biological_processantigen processing and presentation
B0019904molecular_functionprotein domain specific binding
B0030667cellular_componentsecretory granule membrane
B0031175biological_processneuron projection development
B0031410cellular_componentcytoplasmic vesicle
B0031489molecular_functionmyosin V binding
B0032588cellular_componenttrans-Golgi network membrane
B0034067biological_processprotein localization to Golgi apparatus
B0034498biological_processearly endosome to Golgi transport
B0042147biological_processretrograde transport, endosome to Golgi
B0070062cellular_componentextracellular exosome
B0070381cellular_componentendosome to plasma membrane transport vesicle
B0072385biological_processminus-end-directed organelle transport along microtubule
B1903292biological_processprotein localization to Golgi membrane
C0000139cellular_componentGolgi membrane
C0002080cellular_componentacrosomal membrane
C0003924molecular_functionGTPase activity
C0005515molecular_functionprotein binding
C0005525molecular_functionGTP binding
C0005789cellular_componentendoplasmic reticulum membrane
C0005794cellular_componentGolgi apparatus
C0005802cellular_componenttrans-Golgi network
C0005829cellular_componentcytosol
C0005886cellular_componentplasma membrane
C0006886biological_processintracellular protein transport
C0006890biological_processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
C0006891biological_processintra-Golgi vesicle-mediated transport
C0012505cellular_componentendomembrane system
C0015031biological_processprotein transport
C0016020cellular_componentmembrane
C0016192biological_processvesicle-mediated transport
C0018125biological_processpeptidyl-cysteine methylation
C0019882biological_processantigen processing and presentation
C0019904molecular_functionprotein domain specific binding
C0030667cellular_componentsecretory granule membrane
C0031175biological_processneuron projection development
C0031410cellular_componentcytoplasmic vesicle
C0031489molecular_functionmyosin V binding
C0032588cellular_componenttrans-Golgi network membrane
C0034067biological_processprotein localization to Golgi apparatus
C0034498biological_processearly endosome to Golgi transport
C0042147biological_processretrograde transport, endosome to Golgi
C0070062cellular_componentextracellular exosome
C0070381cellular_componentendosome to plasma membrane transport vesicle
C0072385biological_processminus-end-directed organelle transport along microtubule
C1903292biological_processprotein localization to Golgi membrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 501
ChainResidue
ALYS26
ATHR27
ATHR45
AASP68
ATHR69
AGTP500

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 501
ChainResidue
BASP68
BTHR69
BGTP500
BLYS26
BTHR27
BTHR45

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 501
ChainResidue
CLYS26
CTHR27
CTHR45
CASP68
CTHR69
CGTP500

site_idAC4
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GTP A 500
ChainResidue
AGLU21
AGLN22
ASER23
AVAL24
AGLY25
ALYS26
ATHR27
ASER28
APHE38
AASP39
AASN40
ATYR42
AGLN43
AALA44
ATHR45
AGLY71
AASN126
ALYS127
AASP129
ALEU130
ASER156
AALA157
ALYS158
AMG501

site_idAC5
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GTP B 500
ChainResidue
BGLU21
BGLN22
BSER23
BVAL24
BGLY25
BLYS26
BTHR27
BSER28
BPHE38
BASP39
BASN40
BTYR42
BGLN43
BALA44
BTHR45
BGLY71
BASN126
BLYS127
BASP129
BLEU130
BSER156
BALA157
BLYS158
BMG501

site_idAC6
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GTP C 500
ChainResidue
CGLU21
CGLN22
CSER23
CVAL24
CGLY25
CLYS26
CTHR27
CSER28
CPHE38
CASP39
CASN40
CTYR42
CGLN43
CALA44
CTHR45
CGLY71
CASN126
CLYS127
CASP129
CLEU130
CSER156
CALA157
CLYS158
CMG501

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:16964243, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163
ChainResidueDetails
DALA1584
CASP68
CASN126
CSER156
EALA1584
FALA1584
ASER156
BGLY20
BASP68
BASN126
BSER156
CGLY20

site_idSWS_FT_FI2
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
DILE1588
EILE1588
FILE1588

site_idSWS_FT_FI3
Number of Residues3
DetailsMOD_RES: O-AMP-tyrosine; by Legionella DrrA => ECO:0000269|PubMed:21822290
ChainResidueDetails
ATYR82
BTYR82
CTYR82

site_idSWS_FT_FI4
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P35279
ChainResidueDetails
ASER184
BSER184
CSER184

site_idSWS_FT_FI5
Number of Residues3
DetailsLIPID: S-geranylgeranyl cysteine => ECO:0000250
ChainResidueDetails
ACYS206
BCYS206
CCYS206

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ALEU72

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BLEU72

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CLEU72

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ASER23

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BSER23

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CSER23

223166

PDB entries from 2024-07-31

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