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3BAR

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-azido-UMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005515molecular_functionprotein binding
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005515molecular_functionprotein binding
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE U5P A 3000
ChainResidue
AASP23
AGLY293
AARG294
AHOH3006
AHOH3007
AHOH3010
AHOH3011
AHOH3019
BASP141
BILE142
BTHR145
ALYS102
AASN104
AASP136
ALYS138
ATHR194
ATHR195
APRO264
AGLN269

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE U5P B 3000
ChainResidue
AASP141
ATHR145
BASP23
BLYS102
BASN104
BASP136
BLYS138
BTHR194
BTHR195
BPRO264
BGLN269
BGLY293
BARG294
BHOH3002
BHOH3007
BHOH3010
BHOH3016
BHOH3022

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. TIlDmKinDIGnTV
ChainResidueDetails
ATHR133-VAL146

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
AASP136
ALYS138

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BASP136
BLYS138

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
ALYS102
AASP136
ALYS138
AASP141

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BLYS102
BASP136
BLYS138
BASP141

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PDB entries from 2024-09-04

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