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3AKC

Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8

Functional Information from GO Data
ChainGOidnamespacecontents
A0004127molecular_function(d)CMP kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0006220biological_processpyrimidine nucleotide metabolic process
A0016301molecular_functionkinase activity
A0036430molecular_functionCMP kinase activity
A0036431molecular_functiondCMP kinase activity
A0044281biological_processsmall molecule metabolic process
A0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE CDP A 209
ChainResidue
ASER11
AARG126
AASP127
AARG153
AARG171
AASP175
AGLN178
AADP210
AGD211
AHOH218
AHOH219
ALYS15
AHOH223
AHOH269
ASER33
AGLY34
ATYR37
AARG38
AVAL97
AALA101
AARG107

site_idAC2
Number of Residues24
DetailsBINDING SITE FOR RESIDUE ADP A 210
ChainResidue
APRO10
AALA12
ASER13
AGLY14
ALYS15
ASER16
ASER17
AASP80
AGLU82
AARG152
AARG153
AARG155
AGLU156
AMET193
ATHR194
ALEU195
ACDP209
AGD211
AHOH218
AHOH223
AHOH226
AHOH247
AHOH256
AHOH257

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GD A 211
ChainResidue
ASER16
ACDP209
AADP210
AHOH218
AHOH223
AHOH226
AHOH269

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00238
ChainResidueDetails
AGLY9

222415

PDB entries from 2024-07-10

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