3AK1
Superoxide dismutase from Aeropyrum pernix K1, apo-form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004784 | molecular_function | superoxide dismutase activity |
| A | 0006801 | biological_process | superoxide metabolic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0019430 | biological_process | removal of superoxide radicals |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004784 | molecular_function | superoxide dismutase activity |
| B | 0006801 | biological_process | superoxide metabolic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0019430 | biological_process | removal of superoxide radicals |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004784 | molecular_function | superoxide dismutase activity |
| C | 0006801 | biological_process | superoxide metabolic process |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0019430 | biological_process | removal of superoxide radicals |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004784 | molecular_function | superoxide dismutase activity |
| D | 0006801 | biological_process | superoxide metabolic process |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0019430 | biological_process | removal of superoxide radicals |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 215 |
| Chain | Residue |
| A | PRO11 |
| A | LEU12 |
| A | TYR14 |
| A | TYR16 |
| A | HOH311 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 216 |
| Chain | Residue |
| B | EDO217 |
| B | HOH424 |
| A | GLU20 |
| B | ILE24 |
| B | LEU173 |
| B | GLN174 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 217 |
| Chain | Residue |
| A | ASN15 |
| A | ASN17 |
| B | EDO216 |
| B | EDO217 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 218 |
| Chain | Residue |
| A | ILE23 |
| A | MET28 |
| A | HIS31 |
| A | PHE82 |
| A | ALA170 |
| A | TYR182 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 219 |
| Chain | Residue |
| A | HIS35 |
| A | THR38 |
| A | HOH259 |
| A | HOH290 |
| A | HOH447 |
| C | ASN177 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 220 |
| Chain | Residue |
| A | LEU47 |
| A | GLU51 |
| A | HOH396 |
| A | HOH601 |
| B | GLN107 |
| B | ARG143 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 221 |
| Chain | Residue |
| A | HIS53 |
| A | HOH271 |
| A | HOH538 |
| B | ALA116 |
| B | LEU117 |
| B | ALA120 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 222 |
| Chain | Residue |
| A | ARG143 |
| A | ILE144 |
| A | HOH508 |
| B | LEU47 |
| B | PHE69 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 223 |
| Chain | Residue |
| A | GLY127 |
| A | GLU168 |
| A | ARG179 |
| A | HOH567 |
| C | TRP167 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 215 |
| Chain | Residue |
| B | PRO11 |
| B | LEU12 |
| B | TYR14 |
| B | TYR16 |
| B | HIS32 |
| B | HOH272 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO B 216 |
| Chain | Residue |
| A | EDO217 |
| B | PRO21 |
| B | ASN185 |
| B | EDO217 |
| B | HOH221 |
| site_id | BC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO B 217 |
| Chain | Residue |
| A | ASN17 |
| A | GLU20 |
| A | EDO216 |
| A | EDO217 |
| A | HOH300 |
| B | GLN174 |
| B | EDO216 |
| B | HOH464 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO B 218 |
| Chain | Residue |
| B | ALA64 |
| B | ASP68 |
| B | HOH225 |
| B | HOH257 |
| C | ASP61 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 219 |
| Chain | Residue |
| B | GLU148 |
| B | LYS149 |
| D | GLU148 |
| D | LYS149 |
| site_id | BC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EDO B 220 |
| Chain | Residue |
| B | VAL125 |
| B | GLY127 |
| B | GLU168 |
| B | ARG179 |
| B | HOH336 |
| B | HOH513 |
| D | TRP167 |
| D | HOH293 |
| D | HOH586 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO C 215 |
| Chain | Residue |
| A | GLU148 |
| C | GLU148 |
| C | EDO218 |
| site_id | BC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO C 216 |
| Chain | Residue |
| B | ALA64 |
| B | ARG67 |
| B | ASP68 |
| B | HOH248 |
| C | ALA64 |
| C | ARG67 |
| C | ASP68 |
| C | HOH263 |
| site_id | BC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 217 |
| Chain | Residue |
| C | LEU142 |
| C | ARG143 |
| C | HOH284 |
| C | HOH289 |
| C | HOH374 |
| C | GLN107 |
| C | PHE108 |
| site_id | CC1 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EDO C 218 |
| Chain | Residue |
| A | VAL128 |
| A | LYS149 |
| C | GLU126 |
| C | GLY127 |
| C | VAL128 |
| C | GLU148 |
| C | LYS149 |
| C | EDO215 |
| C | HOH400 |
| site_id | CC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 219 |
| Chain | Residue |
| C | TYR7 |
| C | GLU8 |
| C | HIS76 |
| C | HOH477 |
| site_id | CC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 215 |
| Chain | Residue |
| D | PRO11 |
| D | LEU12 |
| D | TYR14 |
| D | TYR16 |
| site_id | CC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO D 216 |
| Chain | Residue |
| B | ASN177 |
| D | LYS34 |
| D | HIS35 |
| D | THR38 |
| D | HOH266 |
| D | HOH293 |
| D | HOH569 |
| D | HOH611 |
| site_id | CC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO D 217 |
| Chain | Residue |
| D | LYS55 |
| D | GLU57 |
| site_id | CC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO D 218 |
| Chain | Residue |
| D | PRO96 |
| D | GLY97 |
| D | GLY98 |
| D | TRP192 |
| D | ASP193 |
| D | GLU196 |
| site_id | CC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO D 219 |
| Chain | Residue |
| B | HIS35 |
| D | GLU168 |
| D | TYR171 |
| D | TYR172 |
| D | ASN177 |
| D | HOH270 |
| D | HOH387 |
| site_id | CC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 220 |
| Chain | Residue |
| D | GLY56 |
| D | ILE58 |
| D | GLN59 |
| D | HOH239 |
Functional Information from PROSITE/UniProt
| site_id | PS00088 |
| Number of Residues | 8 |
| Details | SOD_MN Manganese and iron superoxide dismutases signature. DvWEHAYY |
| Chain | Residue | Details |
| A | ASP165-TYR172 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P80293","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
