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3AJD

Crystal structure of ATRM4

Functional Information from GO Data
ChainGOidnamespacecontents
A0001510biological_processRNA methylation
A0003723molecular_functionRNA binding
A0005737cellular_componentcytoplasm
A0006396biological_processRNA processing
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0008173molecular_functionRNA methyltransferase activity
A0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
A0016428molecular_functiontRNA (cytidine-5-)-methyltransferase activity
A0016740molecular_functiontransferase activity
A0030488biological_processtRNA methylation
A0032259biological_processmethylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 900
ChainResidue
AARG144
AARG189
AGLU192
AHOH493

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IPA A 950
ChainResidue
AGLU250
AGLY251
AARG258
APHE260

Functional Information from PROSITE/UniProt
site_idPS01153
Number of Residues12
DetailsNOL1_NOP2_SUN NOL1/NOP2/sun family signature. FDKILlDAPCSG
ChainResidueDetails
APHE157-GLY168

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000305
ChainResidueDetails
ACYS212

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING:
ChainResidueDetails
ACYS91
AGLU115
AARG120
AASP142
AASP163
AASN169
AARG189

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PDB entries from 2025-06-11

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