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3AGG

X-ray analysis of lysozyme in the absence of Arg

Functional Information from GO Data
ChainGOidnamespacecontents
G0003796molecular_functionlysozyme activity
G0005515molecular_functionprotein binding
G0005576cellular_componentextracellular region
G0005615cellular_componentextracellular space
G0005737cellular_componentcytoplasm
G0005783cellular_componentendoplasmic reticulum
G0016231molecular_functionbeta-N-acetylglucosaminidase activity
G0016798molecular_functionhydrolase activity, acting on glycosyl bonds
G0016998biological_processcell wall macromolecule catabolic process
G0031640biological_processkilling of cells of another organism
G0042742biological_processdefense response to bacterium
G0042802molecular_functionidentical protein binding
G0050829biological_processdefense response to Gram-negative bacterium
G0050830biological_processdefense response to Gram-positive bacterium
G0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL G 130
ChainResidue
GTYR23
GASN113
GHOH300

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL G 131
ChainResidue
GASN65
GGLY67
GARG68
GTHR69
GSER72
GHOH223

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL G 132
ChainResidue
GSER24
GGLY26
GGLN121
GILE124
GHOH292

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL G 133
ChainResidue
GASN65
GGLY67
GHOH163
GHOH171

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL G 134
ChainResidue
GASN65
GHOH265

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL G 135
ChainResidue
GILE88

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL G 136
ChainResidue
GTYR53
GGLY54
GILE55
GLEU56
GGLN57
GSER91

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL G 137
ChainResidue
GTRP111
GARG114
GHOH206
GHOH210

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL G 138
ChainResidue
GGLY49
GSER50
GTHR51
GASP66
GARG68
GTHR69

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA G 139
ChainResidue
GSER60
GCYS64
GSER72
GARG73
GHOH173
GHOH209

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT G 140
ChainResidue
GGLN57
GILE58
GASN59
GTRP63
GALA107
GTRP108
GHOH262

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
GCYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
GGLU35
GASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
GASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
GGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
GASN46
GASP48
GSER50
GASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
GASN59

219140

PDB entries from 2024-05-01

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