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3AF5

The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004519molecular_functionendonuclease activity
A0004527molecular_functionexonuclease activity
A0006353biological_processDNA-templated transcription termination
A0008270molecular_functionzinc ion binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 652
ChainResidue
AARG202
ATYR229
ALYS230
AHIS234
AASN644
AARG649
AARG651

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 653
ChainResidue
AGLY119
ALYS117
APRO118

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 654
ChainResidue
AHIS258
AILE345
AGLY434
AARG435
AHOH677
AHOH730

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 655
ChainResidue
AARG198
AARG613
AASN643

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 656
ChainResidue
AARG336
AHIS352
AHIS354
AASN361
APRO384
AARG385

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 657
ChainResidue
AVAL200
AASP260
AASP367
AHIS594
AHIS618
AZN662
AZN665

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY A 658
ChainResidue
AASN341
AGLU377
AGLU474
ATYR475
ALEU476
AGLU573

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACY A 659
ChainResidue
APRO310
AARG311

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACY A 660
ChainResidue
AILE321
ATHR322

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACY A 661
ChainResidue
AASP324
ATYR325
AGLU474
ATYR475
AGLU573

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 662
ChainResidue
AHIS256
AHIS258
AHIS344
AASP367
ASO4657
AZN665

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 663
ChainResidue
AGLU387
AGLU612

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 664
ChainResidue
AASP12
AHIS498
AGLU505

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 665
ChainResidue
AASP260
AHIS261
AASP367
AHIS618
ASO4657
AZN662

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:20544974, ECO:0007744|PDB:3AF5, ECO:0007744|PDB:3AF6
ChainResidueDetails
AHIS256
AHIS258
AASP260
AHIS261
AHIS344
AASP367
AHIS618

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PDB entries from 2024-07-24

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