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3A4Y

Crystal Structure of H61A mutant TTHA0252 from Thermus thermophilus HB8

Replaces:  2ZDW
Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0003723molecular_functionRNA binding
B0004518molecular_functionnuclease activity
B0004519molecular_functionendonuclease activity
B0004521molecular_functionRNA endonuclease activity
B0005737cellular_componentcytoplasm
B0006364biological_processrRNA processing
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
C0003723molecular_functionRNA binding
C0004518molecular_functionnuclease activity
C0004519molecular_functionendonuclease activity
C0004521molecular_functionRNA endonuclease activity
C0005737cellular_componentcytoplasm
C0006364biological_processrRNA processing
C0016787molecular_functionhydrolase activity
C0046872molecular_functionmetal ion binding
D0003723molecular_functionRNA binding
D0004518molecular_functionnuclease activity
D0004519molecular_functionendonuclease activity
D0004521molecular_functionRNA endonuclease activity
D0005737cellular_componentcytoplasm
D0006364biological_processrRNA processing
D0016787molecular_functionhydrolase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 432
ChainResidue
AARG84
ALEU88
AARG263
DGLU270

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 433
ChainResidue
APRO172
AASP173
ASER269
AGLU270

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 434
ChainResidue
AARG202
AHOH498
AGLU199

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 435
ChainResidue
ATYR189
APHE223
AARG227
ASER378
AGLY379

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 436
ChainResidue
AARG284
AVAL290

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 A 437
ChainResidue
AARG354

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 A 438
ChainResidue
AARG24

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 439
ChainResidue
APRO243
AARG244
BARG302

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 440
ChainResidue
AMET1
AARG2

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 441
ChainResidue
AGLY318
AGLY319
AHOH454

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 442
ChainResidue
AARG2
AGLY426
AGLY428

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 443
ChainResidue
ATHR222
APHE223
AALA224
AGLY314

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 444
ChainResidue
ALYS298
AASN301
AHIS323
ALYS326
AHIS327

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 445
ChainResidue
AARG359
AGLY362
CARG359

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 446
ChainResidue
AARG24
AARG128
ALEU129
AGLY130

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 448
ChainResidue
AHIS293
BARG284

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 449
ChainResidue
AHIS238
AHIS240
AARG241
AHOH479
AHOH499
BPRO366
BARG368

site_idBC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 A 450
ChainResidue
AARG368

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FLC A 451
ChainResidue
ALYS280
AASN281
AARG284
BHIS293

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 452
ChainResidue
AASP63
AHIS64
AASP162
AHIS400

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 433
ChainResidue
BARG84
BARG263
BHOH452

site_idCC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 434
ChainResidue
BPRO243
BARG244

site_idCC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 435
ChainResidue
BARG354

site_idCC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 436
ChainResidue
BHIS293
BTHR294
BARG320

site_idCC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 437
ChainResidue
BARG368

site_idCC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 439
ChainResidue
AARG244
BASN301
BHIS323
BLYS326
BHIS327

site_idCC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 440
ChainResidue
BTHR222
BPHE223
BALA224
BGLY314
BHOH458

site_idDC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 441
ChainResidue
BARG359
BGLY362

site_idDC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 442
ChainResidue
BARG2
BGLY426
BGLY428

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 443
ChainResidue
BPRO172
BASP173
BSER269
BGLU270

site_idDC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 444
ChainResidue
BTYR189
BARG227
BSER378
BGLY379
BHIS380

site_idDC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 445
ChainResidue
BARG24
BLEU129
BGLY130

site_idDC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 446
ChainResidue
BARG284
BVAL290
BHOH497

site_idDC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FLC B 447
ChainResidue
ALEU407
ALYS411
BLEU407
BLYS411

site_idDC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 448
ChainResidue
BASP63
BHIS64
BASP162
BHIS400

site_idDC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 432
ChainResidue
CARG24
CLYS50

site_idEC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 C 433
ChainResidue
CARG155

site_idEC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 C 434
ChainResidue
CARG77
CGLU113
CHIS117

site_idEC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 C 435
ChainResidue
CTYR189
CARG227
CTYR341
CSER378
CGLY379
CHIS380

site_idEC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 436
ChainResidue
CPHE223
CALA224
CSER313
CGLY314

site_idEC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 C 437
ChainResidue
CLYS99
CPRO252
CARG256

site_idEC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 438
ChainResidue
CPRO172
CASP173
CSER269
CGLU270

site_idEC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 439
ChainResidue
CARG2
CGLY428

site_idEC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 C 440
ChainResidue
CARG84

site_idEC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 441
ChainResidue
CHIS327
DLYS411

site_idFC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 442
ChainResidue
CARG24
CARG128
CLEU129
CGLY130

site_idFC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 443
ChainResidue
CARG84
CLEU88
CARG263
CHOH458

site_idFC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 444
ChainResidue
CLYS298
CASN301
CHIS323
CHIS327

site_idFC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FLC C 445
ChainResidue
CARG10
CGLU403
CARG424

site_idFC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 446
ChainResidue
CASP63
CHIS64
CASP162
CHIS400

site_idFC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 432
ChainResidue
DLYS298
DASN301
DHIS323
DLYS326
DHIS327

site_idFC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 D 433
ChainResidue
DARG24

site_idFC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 434
ChainResidue
DARG2
DGLY426
DGLY428

site_idFC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 D 435
ChainResidue
DMET1
DARG2

site_idGC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 436
ChainResidue
DARG24
DARG128
DGLY130

site_idGC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 437
ChainResidue
AARG84
DPRO172
DASP173
DSER269
DGLU270

site_idGC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 438
ChainResidue
DTHR222
DPHE223
DALA224
DSER313
DGLY314

site_idGC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 439
ChainResidue
DVAL290
DVAL291
DGLU292
DALA296

site_idGC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 D 440
ChainResidue
DTYR189
DARG227
DGLY340
DTYR341
DSER378
DGLY379
DHIS380

site_idGC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 441
ChainResidue
DASP63
DHIS64
DASP162
DHIS400

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsBINDING:
ChainResidueDetails
AHIS59
BASP63
BHIS64
BHIS141
BASP162
BHIS400
CHIS59
CALA61
CASP63
CHIS64
CHIS141
AALA61
CASP162
CHIS400
DHIS59
DALA61
DASP63
DHIS64
DHIS141
DASP162
DHIS400
AASP63
AHIS64
AHIS141
AASP162
AHIS400
BHIS59
BALA61

238268

PDB entries from 2025-07-02

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