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2ZNR

Crystal structure of the DUB domain of human AMSH-LP

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0016579biological_processprotein deubiquitination
A0061578molecular_functionK63-linked deubiquitinase activity
A0070536biological_processprotein K63-linked deubiquitination
A0140492molecular_functionmetal-dependent deubiquitinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1
ChainResidue
AHIS362
ACYS402
AHIS408
AHIS410

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 2
ChainResidue
AHIS347
AHIS349
AASP360
AHOH517

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PR A 437
ChainResidue
AASP427
AHOH705
AHOH706
AHOH707
AHOH708
AASP274

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 438
ChainResidue
ATYR322
AASP324
ALYS429
AHOH454
AHOH538
AHOH630

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 439
ChainResidue
ALEU271
APRO272
AGLU273
ALEU275
ACYS276

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 3
ChainResidue
ACYS420
AVAL423
AHOH469
AHOH470
AHOH557

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 4
ChainResidue
AHIS262
AGLU264
ATHR307
AHOH458
AHOH490
AHOH536

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 5
ChainResidue
AARG267
AASN304
ALEU369
AHOH477
AHOH656

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 6
ChainResidue
AGLU284
AGLU305
AHOH606
AHOH655

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 7
ChainResidue
ALYS315
APRO409
AARG436
AHOH519

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues128
DetailsDomain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues13
DetailsMotif: {"description":"JAMM motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18758443","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2ZNR","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18758443","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"34425109","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2ZNR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7L97","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsSite: {"description":"Indirect zinc-binding","evidences":[{"source":"PubMed","id":"18758443","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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