2ZNR
Crystal structure of the DUB domain of human AMSH-LP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-01 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.00000 |
Spacegroup name | P 65 |
Unit cell lengths | 81.865, 81.865, 64.693 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.090 - 1.200 |
R-factor | 0.14962 |
Rwork | 0.149 |
R-free | 0.16546 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.261 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.890 | 1.210 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmerge | 0.046 | 0.158 |
Number of reflections | 76845 | |
<I/σ(I)> | 34.3 | 14.1 |
Completeness [%] | 99.4 | 98.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 45mM sodium acetate buffer (pH 4.6), 22% PEG 4000, 90mM ammonium acetate, 10mM praseodymium (III) acetate, VAPOR DIFFUSION, SITTING DROP, temperature 293K |