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2ZGH

Crystal Structure of active granzyme M bound to its product

Functional Information from GO Data
ChainGOidnamespacecontents
A0001913biological_processT cell mediated cytotoxicity
A0004175molecular_functionendopeptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0006508biological_processproteolysis
A0006915biological_processapoptotic process
A0008236molecular_functionserine-type peptidase activity
A0016020cellular_componentmembrane
A0031640biological_processkilling of cells of another organism
A0045087biological_processinnate immune response
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 241
ChainResidue
ATHR128
ASER135
AARG136
AVAL137
AARG139

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 242
ChainResidue
ALYS173
AHOH296
AGLN45
AARG46
AMET47
AALA48

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 243
ChainResidue
AARG51
AHIS67
AHOH359

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 244
ChainResidue
ALYS34
AGLN91
AARG203
AHOH375
AHOH409

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 245
ChainResidue
AGLY189
ALYS190
AHOH397

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
ALEU37-CYS42

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. APckGDSGGPLV
ChainResidueDetails
AALA176-VAL187

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system => ECO:0000269|PubMed:19542453
ChainResidueDetails
AHIS41
AASP86
ASER182

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN152

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER182
AASP86
AHIS41

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER182
AGLY183
AASP86
AHIS41

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP86
AHIS41

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AGLY180
ASER182

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER182
AGLY183

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AGLY180
ASER182
AASP86
AHIS41

222415

PDB entries from 2024-07-10

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