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2YYU

Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE C5P A 1301
ChainResidue
AASP12
BHOH2321
ALYS34
ATHR124
AARG186
AGLY215
AARG216
AHOH1307
AHOH1320
AHOH1349

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE C5P B 2301
ChainResidue
AHOH1315
BALA10
BASP12
BLYS34
BTHR124
BPRO183
BARG186
BGLY215
BARG216
BHOH2304
BHOH2324

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. VFlDlKlhDIPnTV
ChainResidueDetails
AVAL58-VAL71

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_01200
ChainResidueDetails
ALYS63
BLYS63

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01200
ChainResidueDetails
AASP12
BLYS34
BASP61
BTHR124
BARG186
BGLN195
BGLY215
BARG216
ALYS34
AASP61
ATHR124
AARG186
AGLN195
AGLY215
AARG216
BASP12

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
AASP61
ALYS63

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BASP61
BLYS63

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
AASP61
ALYS34
ALYS63
AASP66

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BASP61
BLYS34
BLYS63
BASP66

225158

PDB entries from 2024-09-18

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