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2YIC

Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase (triclinic form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0016624molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
A0030976molecular_functionthiamine pyrophosphate binding
B0016624molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
B0030976molecular_functionthiamine pyrophosphate binding
C0016624molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C0030976molecular_functionthiamine pyrophosphate binding
D0016624molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
D0030976molecular_functionthiamine pyrophosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE TPP A 2001
ChainResidue
AARG540
AILE680
AGLY681
AHIS747
AMG2002
AHOH3046
AHOH3048
AHOH3082
AHOH3083
AHOH3365
BGLN901
ASER604
BLEU950
BGLU952
BGLN976
BPHE980
AHIS605
ALEU606
AGLY644
AASP645
AALA646
AALA647
AASN678

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 2002
ChainResidue
AASP645
AASN678
AILE680
ATPP2001
AHOH3083

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 2003
ChainResidue
AASP1004
AHIS1055
AASP1058
AILE1060
AHOH3252
AHOH3253

site_idAC4
Number of Residues23
DetailsBINDING SITE FOR RESIDUE TPP B 2001
ChainResidue
AGLN901
ALEU950
AGLU952
AGLN976
APHE980
BARG540
BSER604
BHIS605
BLEU606
BGLY644
BASP645
BALA646
BALA647
BASN678
BILE680
BGLY681
BHIS747
BMG2002
BHOH3050
BHOH3083
BHOH3084
BHOH3104
BHOH3275

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 2002
ChainResidue
BASP645
BASN678
BILE680
BTPP2001
BHOH3084

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 2003
ChainResidue
BASP1004
BHIS1055
BASP1058
BILE1060
BHOH3198
BHOH3199

site_idAC7
Number of Residues22
DetailsBINDING SITE FOR RESIDUE TPP C 2001
ChainResidue
CARG540
CSER604
CHIS605
CLEU606
CGLY644
CASP645
CALA646
CALA647
CASN678
CILE680
CGLY681
CHIS747
CMG2002
CHOH3072
CHOH3073
CHOH3100
CHOH3338
DGLN901
DLEU950
DGLU952
DGLN976
DPHE980

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG C 2002
ChainResidue
CASP645
CASN678
CILE680
CTPP2001
CHOH3073

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 2003
ChainResidue
CHOH3236
CHOH3237
CASP1004
CHIS1055
CASP1058
CILE1060

site_idBC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE TPP D 2001
ChainResidue
CGLN901
CLEU950
CGLU952
CGLN976
CPHE980
DARG540
DSER604
DHIS605
DLEU606
DGLY644
DASP645
DALA646
DALA647
DASN678
DILE680
DGLY681
DHIS747
DMG2002
DHOH3066
DHOH3067
DHOH3084
DHOH3243

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG D 2002
ChainResidue
DASP645
DASN678
DILE680
DTPP2001
DHOH3067

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA D 2003
ChainResidue
DASP1004
DHIS1055
DASP1058
DILE1060
DHOH3174
DHOH3175

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues60
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21867916","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XTA","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21867916","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"2Y0P","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues62
DetailsCoiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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