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2YFR

Crystal structure of inulosucrase from Lactobacillus johnsonii NCC533

Functional Information from GO Data
ChainGOidnamespacecontents
A0009758biological_processcarbohydrate utilization
A0050053molecular_functionlevansucrase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 1709
ChainResidue
AASP419
AGLN450
ATRP487
AASN489
AASP521
AHOH2276

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1710
ChainResidue
AGLN338
ATYR355
ALYS357

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 1711
ChainResidue
ALYS250
AASN320
ASO41721
AHOH2497

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 1712
ChainResidue
AASP500
AASN503
AHOH2336

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACT A 1713
ChainResidue
AARG545

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1714
ChainResidue
AGLU625
ALYS629
AGLY630
AHIS632
AHOH2088
AHOH2498

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1715
ChainResidue
ALYS264
ALYS264
AVAL265
AHOH2079
AHOH2499
AHOH2501

site_idAC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 1716
ChainResidue
AASN364
AHIS390
AASP392
ALYS678
APRO687
AGLY688
AHOH2240
AHOH2502
AHOH2503

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1717
ChainResidue
ATYR376
AASP392
AASN393
ALYS502
AHOH2470

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1718
ChainResidue
AASP318
AASN320
AHIS321

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1719
ChainResidue
ALYS248
AASN669
AASP671
ASO41721
AHOH2504

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1720
ChainResidue
ASER211
ALYS212
AGLU213

site_idBC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 1721
ChainResidue
ASER247
ALYS248
AGLU380
AASP382
AACT1711
ASO41719
AHOH2051
AHOH2505
AHOH2506
AHOH2507

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1722
ChainResidue
AARG238
AARG238
AHOH2508

site_idBC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 1723
ChainResidue
AASP272
ATRP339
ASER340
AARG424
AASP425
AGLU441
AGLU524
AGOL1730
AGOL1731

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1724
ChainResidue
AASP480
AARG484
AMET553
AASN556
ALYS557
AASP695
ALEU698

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1725
ChainResidue
AARG610
ALYS654
ATRP663
AHOH2447
AHOH2509

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1726
ChainResidue
AASP431
AASP432
ATYR535
ALEU573
AHOH2510

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1727
ChainResidue
AASP318
AASN657
AHOH2511
AHOH2512

site_idCC2
Number of Residues14
DetailsBINDING SITE FOR RESIDUE GOL A 1728
ChainResidue
AALA558
AVAL559
AGLY560
APRO592
AVAL694
ALEU698
AILE699
AGLY700
AGLY701
ATYR702
AASN703
ALEU704
AASN556
ALYS557

site_idCC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1729
ChainResidue
ALYS534
AVAL569
ASER570
AASP571
AASN647
AHOH2513
AHOH2514

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1730
ChainResidue
ATRP271
AMET296
AASN305
AARG623
AGOL1723

site_idCC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1731
ChainResidue
AASP272
AGLU524
AARG542
ATYR600
ASER601
ATYR619
AARG623
AGOL1723

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000303|PubMed:21801732
ChainResidueDetails
AASP272

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000303|PubMed:21801732
ChainResidueDetails
AGLU524

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:21801732
ChainResidueDetails
ATRP271
ASER340
AARG424
AGLU522
AARG542

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:21801732, ECO:0007744|PDB:2YFS
ChainResidueDetails
AASN317
AASP660
AILE662
ASER667

site_idSWS_FT_FI5
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:21801732, ECO:0007744|PDB:2YFR, ECO:0007744|PDB:2YFS, ECO:0007744|PDB:2YFT
ChainResidueDetails
AASP419
AGLN450
ATRP487
AASN489
AASP521

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000303|PubMed:21801732
ChainResidueDetails
AASP425

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PDB entries from 2024-10-16

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