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2YAZ

The Crystal Structure of Leishmania major dUTPase in complex dUMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004170molecular_functiondUTP diphosphatase activity
A0005654cellular_componentnucleoplasm
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0004170molecular_functiondUTP diphosphatase activity
B0005654cellular_componentnucleoplasm
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
D0004170molecular_functiondUTP diphosphatase activity
D0005654cellular_componentnucleoplasm
D0016787molecular_functionhydrolase activity
D0046872molecular_functionmetal ion binding
E0004170molecular_functiondUTP diphosphatase activity
E0005654cellular_componentnucleoplasm
E0016787molecular_functionhydrolase activity
E0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UMP A 1265
ChainResidue
AGLN21
AARG186
ATYR191
ALYS198
BLYS59
BTRP60
BTRP61
ALEU24
AASN25
AILE28
ATRP41
AASP79
AHIS82
APHE83
AASN183

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1266
ChainResidue
AVAL197
ALYS198
AVAL199
BLYS62

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1267
ChainResidue
AGLU48
AGLU76
AASP79

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1268
ChainResidue
ALYS59
ALYS62
AASN63

site_idAC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE UMP B 1265
ChainResidue
ATRP60
ATRP61
BGLN21
BLEU24
BASN25
BILE28
BTRP41
BGLU48
BASP79
BHIS82
BPHE83
BLYS179
BASN183
BARG186
BTYR191
BHOH2006

site_idAC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UMP D 1265
ChainResidue
DGLN21
DLEU24
DASN25
DILE28
DTRP41
DASP79
DHIS82
DPHE83
DASN183
DARG186
DTYR191
DMG1266
ELYS59
ETRP60
ETRP61

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG D 1266
ChainResidue
DGLU48
DGLU76
DASP79
DLYS179
DUMP1265

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 1267
ChainResidue
DLYS59
DLYS62
DASN63

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 E 1265
ChainResidue
ELYS59
ELYS62
EASN63

site_idBC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE UMP E 1266
ChainResidue
DTRP60
DTRP61
EGLN21
ELEU24
EASN25
EILE28
ETRP41
EGLU48
EASP79
EHIS82
EPHE83
ELYS179
EASN183
EARG186
ETYR191
EMG1267
EHOH2004

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG E 1267
ChainResidue
EGLU48
EGLU76
EASP79
EUMP1266

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PDB entries from 2025-06-18

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