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2Y7G

Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from C. Cloacamonas acidaminovorans in complex with the product acetoacetate

Functional Information from GO Data
ChainGOidnamespacecontents
A0016740molecular_functiontransferase activity
A0019475biological_processL-lysine fermentation
A0043720molecular_function3-keto-5-aminohexanoate cleavage activity
A0046872molecular_functionmetal ion binding
B0016740molecular_functiontransferase activity
B0019475biological_processL-lysine fermentation
B0043720molecular_function3-keto-5-aminohexanoate cleavage activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
AHIS46
AHIS48
AGLU230
AAAE1276
AHOH2265

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE AAE A 1276
ChainResidue
ATHR106
AASN108
AGLU143
ATYR145
AVAL172
AARG226
AGLU230
AZN301
AHOH2265
AHIS46
AHIS48
ASER82
AGLY84

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1277
ChainResidue
AGLU242
ASER243
AHOH2244
AHOH2266
AHOH2267
AHOH2268
BLEU60

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1278
ChainResidue
AHOH2011
AHOH2012
AHOH2013
AHOH2029
AHOH2107
AHOH2244

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1279
ChainResidue
AHOH2007
AHOH2017
AHOH2021
AHOH2112
AHOH2140

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 301
ChainResidue
BHIS46
BHIS48
BGLU230
BAAE1276
BHOH2230

site_idAC7
Number of Residues13
DetailsBINDING SITE FOR RESIDUE AAE B 1276
ChainResidue
BHIS46
BHIS48
BSER82
BGLY84
BTHR106
BASN108
BGLU143
BTYR145
BVAL172
BARG226
BGLU230
BZN301
BHOH2230

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21632536","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2Y7F","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21632536","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2Y7D","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y7E","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y7F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y7G","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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