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2Y3Q

1.55A structure of apo bacterioferritin from E. coli

Functional Information from GO Data
ChainGOidnamespacecontents
A0004322molecular_functionferroxidase activity
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006826biological_processiron ion transport
A0006879biological_processintracellular iron ion homeostasis
A0006880biological_processintracellular sequestering of iron ion
A0008199molecular_functionferric iron binding
A0015093molecular_functionferrous iron transmembrane transporter activity
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0020037molecular_functionheme binding
A0034755biological_processiron ion transmembrane transport
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
A0140315molecular_functioniron ion sequestering activity
B0004322molecular_functionferroxidase activity
B0005506molecular_functioniron ion binding
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006826biological_processiron ion transport
B0006879biological_processintracellular iron ion homeostasis
B0006880biological_processintracellular sequestering of iron ion
B0008199molecular_functionferric iron binding
B0015093molecular_functionferrous iron transmembrane transporter activity
B0016020cellular_componentmembrane
B0016491molecular_functionoxidoreductase activity
B0020037molecular_functionheme binding
B0034755biological_processiron ion transmembrane transport
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
B0140315molecular_functioniron ion sequestering activity
C0004322molecular_functionferroxidase activity
C0005506molecular_functioniron ion binding
C0005515molecular_functionprotein binding
C0005829cellular_componentcytosol
C0006826biological_processiron ion transport
C0006879biological_processintracellular iron ion homeostasis
C0006880biological_processintracellular sequestering of iron ion
C0008199molecular_functionferric iron binding
C0015093molecular_functionferrous iron transmembrane transporter activity
C0016020cellular_componentmembrane
C0016491molecular_functionoxidoreductase activity
C0020037molecular_functionheme binding
C0034755biological_processiron ion transmembrane transport
C0042802molecular_functionidentical protein binding
C0042803molecular_functionprotein homodimerization activity
C0046872molecular_functionmetal ion binding
C0140315molecular_functioniron ion sequestering activity
D0004322molecular_functionferroxidase activity
D0005506molecular_functioniron ion binding
D0005515molecular_functionprotein binding
D0005829cellular_componentcytosol
D0006826biological_processiron ion transport
D0006879biological_processintracellular iron ion homeostasis
D0006880biological_processintracellular sequestering of iron ion
D0008199molecular_functionferric iron binding
D0015093molecular_functionferrous iron transmembrane transporter activity
D0016020cellular_componentmembrane
D0016491molecular_functionoxidoreductase activity
D0020037molecular_functionheme binding
D0034755biological_processiron ion transmembrane transport
D0042802molecular_functionidentical protein binding
D0042803molecular_functionprotein homodimerization activity
D0046872molecular_functionmetal ion binding
D0140315molecular_functioniron ion sequestering activity
E0004322molecular_functionferroxidase activity
E0005506molecular_functioniron ion binding
E0005515molecular_functionprotein binding
E0005829cellular_componentcytosol
E0006826biological_processiron ion transport
E0006879biological_processintracellular iron ion homeostasis
E0006880biological_processintracellular sequestering of iron ion
E0008199molecular_functionferric iron binding
E0015093molecular_functionferrous iron transmembrane transporter activity
E0016020cellular_componentmembrane
E0016491molecular_functionoxidoreductase activity
E0020037molecular_functionheme binding
E0034755biological_processiron ion transmembrane transport
E0042802molecular_functionidentical protein binding
E0042803molecular_functionprotein homodimerization activity
E0046872molecular_functionmetal ion binding
E0140315molecular_functioniron ion sequestering activity
F0004322molecular_functionferroxidase activity
F0005506molecular_functioniron ion binding
F0005515molecular_functionprotein binding
F0005829cellular_componentcytosol
F0006826biological_processiron ion transport
F0006879biological_processintracellular iron ion homeostasis
F0006880biological_processintracellular sequestering of iron ion
F0008199molecular_functionferric iron binding
F0015093molecular_functionferrous iron transmembrane transporter activity
F0016020cellular_componentmembrane
F0016491molecular_functionoxidoreductase activity
F0020037molecular_functionheme binding
F0034755biological_processiron ion transmembrane transport
F0042802molecular_functionidentical protein binding
F0042803molecular_functionprotein homodimerization activity
F0046872molecular_functionmetal ion binding
F0140315molecular_functioniron ion sequestering activity
G0004322molecular_functionferroxidase activity
G0005506molecular_functioniron ion binding
G0005515molecular_functionprotein binding
G0005829cellular_componentcytosol
G0006826biological_processiron ion transport
G0006879biological_processintracellular iron ion homeostasis
G0006880biological_processintracellular sequestering of iron ion
G0008199molecular_functionferric iron binding
G0015093molecular_functionferrous iron transmembrane transporter activity
G0016020cellular_componentmembrane
G0016491molecular_functionoxidoreductase activity
G0020037molecular_functionheme binding
G0034755biological_processiron ion transmembrane transport
G0042802molecular_functionidentical protein binding
G0042803molecular_functionprotein homodimerization activity
G0046872molecular_functionmetal ion binding
G0140315molecular_functioniron ion sequestering activity
H0004322molecular_functionferroxidase activity
H0005506molecular_functioniron ion binding
H0005515molecular_functionprotein binding
H0005829cellular_componentcytosol
H0006826biological_processiron ion transport
H0006879biological_processintracellular iron ion homeostasis
H0006880biological_processintracellular sequestering of iron ion
H0008199molecular_functionferric iron binding
H0015093molecular_functionferrous iron transmembrane transporter activity
H0016020cellular_componentmembrane
H0016491molecular_functionoxidoreductase activity
H0020037molecular_functionheme binding
H0034755biological_processiron ion transmembrane transport
H0042802molecular_functionidentical protein binding
H0042803molecular_functionprotein homodimerization activity
H0046872molecular_functionmetal ion binding
H0140315molecular_functioniron ion sequestering activity
I0004322molecular_functionferroxidase activity
I0005506molecular_functioniron ion binding
I0005515molecular_functionprotein binding
I0005829cellular_componentcytosol
I0006826biological_processiron ion transport
I0006879biological_processintracellular iron ion homeostasis
I0006880biological_processintracellular sequestering of iron ion
I0008199molecular_functionferric iron binding
I0015093molecular_functionferrous iron transmembrane transporter activity
I0016020cellular_componentmembrane
I0016491molecular_functionoxidoreductase activity
I0020037molecular_functionheme binding
I0034755biological_processiron ion transmembrane transport
I0042802molecular_functionidentical protein binding
I0042803molecular_functionprotein homodimerization activity
I0046872molecular_functionmetal ion binding
I0140315molecular_functioniron ion sequestering activity
J0004322molecular_functionferroxidase activity
J0005506molecular_functioniron ion binding
J0005515molecular_functionprotein binding
J0005829cellular_componentcytosol
J0006826biological_processiron ion transport
J0006879biological_processintracellular iron ion homeostasis
J0006880biological_processintracellular sequestering of iron ion
J0008199molecular_functionferric iron binding
J0015093molecular_functionferrous iron transmembrane transporter activity
J0016020cellular_componentmembrane
J0016491molecular_functionoxidoreductase activity
J0020037molecular_functionheme binding
J0034755biological_processiron ion transmembrane transport
J0042802molecular_functionidentical protein binding
J0042803molecular_functionprotein homodimerization activity
J0046872molecular_functionmetal ion binding
J0140315molecular_functioniron ion sequestering activity
K0004322molecular_functionferroxidase activity
K0005506molecular_functioniron ion binding
K0005515molecular_functionprotein binding
K0005829cellular_componentcytosol
K0006826biological_processiron ion transport
K0006879biological_processintracellular iron ion homeostasis
K0006880biological_processintracellular sequestering of iron ion
K0008199molecular_functionferric iron binding
K0015093molecular_functionferrous iron transmembrane transporter activity
K0016020cellular_componentmembrane
K0016491molecular_functionoxidoreductase activity
K0020037molecular_functionheme binding
K0034755biological_processiron ion transmembrane transport
K0042802molecular_functionidentical protein binding
K0042803molecular_functionprotein homodimerization activity
K0046872molecular_functionmetal ion binding
K0140315molecular_functioniron ion sequestering activity
L0004322molecular_functionferroxidase activity
L0005506molecular_functioniron ion binding
L0005515molecular_functionprotein binding
L0005829cellular_componentcytosol
L0006826biological_processiron ion transport
L0006879biological_processintracellular iron ion homeostasis
L0006880biological_processintracellular sequestering of iron ion
L0008199molecular_functionferric iron binding
L0015093molecular_functionferrous iron transmembrane transporter activity
L0016020cellular_componentmembrane
L0016491molecular_functionoxidoreductase activity
L0020037molecular_functionheme binding
L0034755biological_processiron ion transmembrane transport
L0042802molecular_functionidentical protein binding
L0042803molecular_functionprotein homodimerization activity
L0046872molecular_functionmetal ion binding
L0140315molecular_functioniron ion sequestering activity
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEM A 200
ChainResidue
ALEU19
AHOH2252
AHOH2253
AHOH2254
BASN23
BPHE26
BTYR45
BMET52
BLYS53
BALA55
BASP56
AASN23
BHEM200
BHOH2224
ATYR45
AILE49
AMET52
ALYS53
AHOH2249
AHOH2250
AHOH2251

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM C 200
ChainResidue
CILE22
CASN23
CPHE26
CTYR45
CMET52
CLYS53
CALA55
CASP56
CHOH2234
CHOH2235
CHOH2236
CHOH2237
DASN23
DPHE26
DTYR45
DMET52
DLYS53
DHEM200

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM D 200
ChainResidue
CASN23
CPHE26
CTYR45
CILE49
CMET52
CLYS53
CHEM200
CHOH2234
CHOH2236
DILE22
DASN23
DPHE26
DTYR45
DILE49
DMET52
DLYS53
DALA55
DHOH2241

site_idAC4
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM E 200
ChainResidue
ELEU19
EILE22
EASN23
EPHE26
ETYR45
EILE49
EMET52
ELYS53
EHOH2244
EHOH2245
EHOH2246
EHOH2247
FLEU19
FASN23
FPHE26
FTYR45
FILE49
FMET52
FLYS53
FHEM200
FHOH2235
FHOH2236
FHOH2237

site_idAC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEM F 200
ChainResidue
FHOH2235
FHOH2236
FHOH2237
ELEU19
EASN23
ETYR45
EILE49
EMET52
ELEU71
EHEM200
EHOH2245
EHOH2246
EHOH2247
FLEU19
FILE22
FASN23
FPHE26
FTYR45
FMET52
FLYS53
FALA55
FASP56

site_idAC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM G 200
ChainResidue
GILE22
GASN23
GPHE26
GTYR45
GILE49
GMET52
GLYS53
GALA55
GHOH2246
GHOH2247
HASN23
HTYR45
HILE49
HMET52
HLEU71
HHEM200
HHOH2234
HHOH2235

site_idAC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEM H 200
ChainResidue
GASN23
GTYR45
GILE49
GMET52
GLEU71
GHEM200
GHOH2246
GHOH2247
HASN23
HPHE26
HTYR45
HILE49
HMET52
HLYS53
HALA55
HASP56
HHOH2234
HHOH2235
HHOH2236

site_idAC8
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM I 200
ChainResidue
IASN23
IPHE26
ITYR45
IILE49
IMET52
ILYS53
IALA55
IASP56
IHOH2244
IHOH2245
JLEU19
JASN23
JPHE26
JTYR45
JILE49
JMET52
JLYS53
JHEM200
JHOH2246
JHOH2247
JHOH2248
JHOH2249
JHOH2251

site_idAC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM J 200
ChainResidue
IASN23
ITYR45
IILE49
IMET52
ILYS53
IHEM200
IHOH2244
JASN23
JPHE26
JTYR45
JMET52
JLYS53
JALA55
JASP56
JHOH2246
JHOH2247
JHOH2248
JHOH2249
JHOH2250
JHOH2251

site_idBC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEM K 200
ChainResidue
KASN23
KPHE26
KTYR45
KILE49
KMET52
KHOH2244
KHOH2245
KHOH2246
KHOH2247
KHOH2248
LILE22
LASN23
LPHE26
LTYR45
LMET52
LLYS53
LALA55
LASP56
LHEM200
LHOH2225
LHOH2226

site_idBC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEM L 200
ChainResidue
KILE22
KASN23
KPHE26
KTYR45
KMET52
KLYS53
KALA55
KHEM200
KHOH2244
KHOH2245
KHOH2246
LASN23
LTYR45
LILE49
LMET52
LLYS53
LLEU71
LHOH2225
LHOH2226

site_idBC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 B 1159
ChainResidue
BHIS112
BTYR114
BHOH2170
BHOH2225
BHOH2226
BHOH2227
DGLY106
DTYR107
JSER110
JHIS112
JHOH2198

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1159
ChainResidue
AGLY145
ALEU146
AGLN147
AHOH2255
AHOH2256
JHOH2234

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 J 1159
ChainResidue
JGLY145
JLEU146
JGLN147
JHOH2252
JHOH2253
KHOH2231

site_idBC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 B 1160
ChainResidue
BARG117
BHOH2183
BHOH2228
BHOH2229
BHOH2230
BHOH2231
BHOH2232
DARG117
DHOH2199
FARG117
FHOH2190

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1161
ChainResidue
BGLY145
BLEU146
BGLN147
BHOH2233
BHOH2234
EHOH2232

site_idBC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SO4 C 1158
ChainResidue
CARG117
CHOH2193
CHOH2238
CHOH2239
CHOH2240
CHOH2241
CHOH2242
CHOH2243
GARG117
GHOH2203
KARG117
KHOH2200

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 1159
ChainResidue
CGLY145
CLEU146
CGLN147
CHOH2244
CHOH2245

site_idCC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 C 1160
ChainResidue
ASER110
AHIS112
CHIS112
CTYR114
CHOH2246
CHOH2248
CHOH2249
KGLY106
KHOH2186

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 D 1159
ChainResidue
DGLY145
DLEU146
DGLN147
DHOH2242
DHOH2243
DHOH2244
DHOH2245

site_idCC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SO4 E 1159
ChainResidue
AARG117
AHOH2196
AHOH2198
EARG117
EHOH2203
EHOH2248
EHOH2249
EHOH2250
EHOH2251
EHOH2252
IARG117
IHOH2202

site_idCC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 E 1160
ChainResidue
BHOH2212
EGLY145
ELEU146
EGLN147
EHOH2253
EHOH2254
EHOH2255

site_idCC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 F 1159
ChainResidue
FGLY145
FLEU146
FGLN147
FHOH2238
FHOH2239
FHOH2240
FHOH2241

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 G 1159
ChainResidue
GGLY145
GLEU146
GGLN147
GHOH2248
GHOH2249

site_idCC7
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SO4 H 1159
ChainResidue
HARG117
HHOH2194
HHOH2195
HHOH2237
HHOH2238
HHOH2239
HHOH2240
HHOH2241
JARG117
JHOH2203
LARG117
LHOH2180

site_idCC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 H 1160
ChainResidue
HGLY145
HLEU146
HGLN147
HHOH2242
HHOH2243
HHOH2244
IHOH2232

site_idCC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 I 1159
ChainResidue
IGLY145
ILEU146
IGLN147
IHOH2233
IHOH2246
IHOH2247
IHOH2248

site_idDC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 K 1159
ChainResidue
DHOH2228
KGLY145
KLEU146
KGLN147
KHOH2249
KHOH2250
KHOH2251

site_idDC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 L 1159
ChainResidue
GHOH2235
LGLY145
LLEU146
LGLN147
LHOH2227
LHOH2228
LHOH2229

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 1160
ChainResidue
AARG57
AMET119
AHOH2117
EARG125

site_idDC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 1162
ChainResidue
BARG57
BMET119
BHOH2236
DARG125
DBTB1161

site_idDC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT C 1161
ChainResidue
CARG57
CMET119
CHOH2250
CHOH2251
KARG125
KBTB1161

site_idDC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT D 1160
ChainResidue
DARG57
DMET119
DHOH2121
FARG125

site_idDC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT L 1160
ChainResidue
JARG125
LARG57
LMET119
LHOH2096
LHOH2230

site_idDC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT G 1160
ChainResidue
CARG125
GARG57
GMET119
GHOH2250

site_idDC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT J 1160
ChainResidue
HARG125
JARG57
JMET119
JHOH2254

site_idEC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT K 1160
ChainResidue
GARG125
KARG57
KMET119
KHOH2252

site_idEC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT F 1160
ChainResidue
BARG125
FARG57
FMET119
FHOH2243

site_idEC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT E 1161
ChainResidue
EARG57
EMET119
EHOH2256
IARG125

site_idEC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT I 1160
ChainResidue
AARG125
IARG57
IMET119
IHOH2249
IHOH2250

site_idEC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT H 1161
ChainResidue
HARG57
HMET119
HHOH2245
LARG125
LBTB1161

site_idEC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 I 1161
ChainResidue
EHIS112
ETYR114
GSER110
GHIS112
IGLY106
IHOH2187
IHOH2251
IHOH2252
IHOH2253
IHOH2254

site_idEC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BTB K 1161
ChainResidue
CARG61
CPHE64
CACT1161
KARG125
KGLU128
KGLY129
KASP132
KHOH2253
KHOH2254

site_idEC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BTB I 1162
ChainResidue
EARG61
EPHE64
IARG125
IGLU128
IGLY129
IASP132
IHOH2204
IHOH2256
IHOH2257

site_idEC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BTB D 1161
ChainResidue
BARG61
BPHE64
BACT1162
DARG125
DGLU128
DGLY129
DASP132
DHOH2246
DHOH2247

site_idFC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE BTB L 1161
ChainResidue
HARG61
HPHE64
HACT1161
LARG125
LGLU128
LASP132
LHOH2231
LHOH2233

Functional Information from PROSITE/UniProt
site_idPS00549
Number of Residues19
DetailsBACTERIOFERRITIN Bacterioferritin signature. MkGdtkVInyLnklLgneL
ChainResidueDetails
AMET1-LEU19

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues96
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00085, ECO:0000269|PubMed:17077480
ChainResidueDetails
AGLU18
BHIS46
BASP50
BGLU51
BHIS54
BGLU94
BGLU127
BHIS130
CGLU18
CHIS46
CASP50
AHIS46
CGLU51
CHIS54
CGLU94
CGLU127
CHIS130
DGLU18
DHIS46
DASP50
DGLU51
DHIS54
AASP50
DGLU94
DGLU127
DHIS130
EGLU18
EHIS46
EASP50
EGLU51
EHIS54
EGLU94
EGLU127
AGLU51
EHIS130
FGLU18
FHIS46
FASP50
FGLU51
FHIS54
FGLU94
FGLU127
FHIS130
GGLU18
AHIS54
GHIS46
GASP50
GGLU51
GHIS54
GGLU94
GGLU127
GHIS130
HGLU18
HHIS46
HASP50
AGLU94
HGLU51
HHIS54
HGLU94
HGLU127
HHIS130
IGLU18
IHIS46
IASP50
IGLU51
IHIS54
AGLU127
IGLU94
IGLU127
IHIS130
JGLU18
JHIS46
JASP50
JGLU51
JHIS54
JGLU94
JGLU127
AHIS130
JHIS130
KGLU18
KHIS46
KASP50
KGLU51
KHIS54
KGLU94
KGLU127
KHIS130
LGLU18
BGLU18
LHIS46
LASP50
LGLU51
LHIS54
LGLU94
LGLU127
LHIS130

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: axial binding residue => ECO:0000255|PROSITE-ProRule:PRU00085, ECO:0000269|PubMed:17077480
ChainResidueDetails
AMET52
JMET52
KMET52
LMET52
BMET52
CMET52
DMET52
EMET52
FMET52
GMET52
HMET52
IMET52

224572

PDB entries from 2024-09-04

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