2Y1T

Bacillus subtilis prophage dUTPase in complex with dUDP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000287	molecular_function	magnesium ion binding
A	0004170	molecular_function	dUTP diphosphatase activity
A	0006226	biological_process	dUMP biosynthetic process
A	0009117	biological_process	nucleotide metabolic process
A	0016787	molecular_function	hydrolase activity
A	0032991	cellular_component	protein-containing complex
A	0042802	molecular_function	identical protein binding
A	0046081	biological_process	dUTP catabolic process
A	0046872	molecular_function	metal ion binding
B	0000287	molecular_function	magnesium ion binding
B	0004170	molecular_function	dUTP diphosphatase activity
B	0006226	biological_process	dUMP biosynthetic process
B	0009117	biological_process	nucleotide metabolic process
B	0016787	molecular_function	hydrolase activity
B	0032991	cellular_component	protein-containing complex
B	0042802	molecular_function	identical protein binding
B	0046081	biological_process	dUTP catabolic process
B	0046872	molecular_function	metal ion binding
C	0000287	molecular_function	magnesium ion binding
C	0004170	molecular_function	dUTP diphosphatase activity
C	0006226	biological_process	dUMP biosynthetic process
C	0009117	biological_process	nucleotide metabolic process
C	0016787	molecular_function	hydrolase activity
C	0032991	cellular_component	protein-containing complex
C	0042802	molecular_function	identical protein binding
C	0046081	biological_process	dUTP catabolic process
C	0046872	molecular_function	metal ion binding
D	0000287	molecular_function	magnesium ion binding
D	0004170	molecular_function	dUTP diphosphatase activity
D	0006226	biological_process	dUMP biosynthetic process
D	0009117	biological_process	nucleotide metabolic process
D	0016787	molecular_function	hydrolase activity
D	0032991	cellular_component	protein-containing complex
D	0042802	molecular_function	identical protein binding
D	0046081	biological_process	dUTP catabolic process
D	0046872	molecular_function	metal ion binding
E	0000287	molecular_function	magnesium ion binding
E	0004170	molecular_function	dUTP diphosphatase activity
E	0006226	biological_process	dUMP biosynthetic process
E	0009117	biological_process	nucleotide metabolic process
E	0016787	molecular_function	hydrolase activity
E	0032991	cellular_component	protein-containing complex
E	0042802	molecular_function	identical protein binding
E	0046081	biological_process	dUTP catabolic process
E	0046872	molecular_function	metal ion binding
F	0000287	molecular_function	magnesium ion binding
F	0004170	molecular_function	dUTP diphosphatase activity
F	0006226	biological_process	dUMP biosynthetic process
F	0009117	biological_process	nucleotide metabolic process
F	0016787	molecular_function	hydrolase activity
F	0032991	cellular_component	protein-containing complex
F	0042802	molecular_function	identical protein binding
F	0046081	biological_process	dUTP catabolic process
F	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	18
Details	BINDING SITE FOR RESIDUE DUD B 143

Chain	Residue
A	SER62
B	PRO93
B	HOH2061
B	HOH2088
B	HOH2089
B	HOH2090
B	HOH2091
E	LYS101
E	LYS103
E	HOH2077
A	HOH2051
A	HOH2056
B	ASN74
B	GLY77
B	ILE79
B	TYR83
B	TRP90
B	PHE91

---

site_id	AC2
Number of Residues	16
Details	BINDING SITE FOR RESIDUE DUD C 143

Chain	Residue
B	SER62
B	HOH2082
C	ASN74
C	GLY77
C	VAL78
C	ILE79
C	TYR83
C	TRP90
C	PHE91
C	PRO93
C	HOH2056
C	HOH2060
C	HOH2078
C	HOH2079
C	HOH2080
F	LYS101

---

site_id	AC3
Number of Residues	17
Details	BINDING SITE FOR RESIDUE DUD D 143

Chain	Residue
B	LYS101
B	LYS103
D	ASN74
D	GLY77
D	ILE79
D	TYR83
D	TRP90
D	PHE91
D	PRO93
D	HOH2052
D	HOH2071
D	HOH2072
D	HOH2073
D	HOH2074
D	HOH2075
F	SER62
F	HOH2049

---

site_id	AC4
Number of Residues	13
Details	BINDING SITE FOR RESIDUE DUD E 143

Chain	Residue
E	ARG61
E	SER62
E	SER63
E	HOH2091
E	HOH2092
F	ASN74
F	GLY77
F	VAL78
F	ILE79
F	TYR83
F	TRP90
F	PHE91
F	PRO93

---

site_id	AC5
Number of Residues	14
Details	BINDING SITE FOR RESIDUE DUD E 144

Chain	Residue
D	SER62
D	HOH2039
E	ASN74
E	GLY77
E	ILE79
E	TYR83
E	TRP90
E	PHE91
E	PRO93
E	HOH2056
E	HOH2093
E	HOH2094
E	HOH2095
E	HOH2097

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	ACT_SITE: Proton acceptor => ECO:0000305|PubMed:21358047, ECO:0000305|PubMed:23897460

Chain	Residue	Details
A	ASP80
B	ASP80
C	ASP80
D	ASP80
E	ASP80
F	ASP80

---

site_id	SWS_FT_FI2
Number of Residues	24
Details	BINDING: BINDING => ECO:0000269|PubMed:23897460, ECO:0007744|PDB:4AO5

Chain	Residue	Details
A	SER62
C	ASN74
C	TYR83
C	PHE91
D	SER62
D	ASN74
D	TYR83
D	PHE91
E	SER62
E	ASN74
E	TYR83
A	ASN74
E	PHE91
F	SER62
F	ASN74
F	TYR83
F	PHE91
A	TYR83
A	PHE91
B	SER62
B	ASN74
B	TYR83
B	PHE91
C	SER62

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