Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
A | 0003677 | molecular_function | DNA binding |
A | 0003723 | molecular_function | RNA binding |
A | 0003724 | molecular_function | RNA helicase activity |
A | 0004386 | molecular_function | helicase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0008270 | molecular_function | zinc ion binding |
A | 0016787 | molecular_function | hydrolase activity |
B | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
B | 0003677 | molecular_function | DNA binding |
B | 0003723 | molecular_function | RNA binding |
B | 0003724 | molecular_function | RNA helicase activity |
B | 0004386 | molecular_function | helicase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0008270 | molecular_function | zinc ion binding |
B | 0016787 | molecular_function | hydrolase activity |
D | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
E | 0000184 | biological_process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 1 |
Chain | Residue |
A | CYS123 |
A | CYS126 |
A | CYS145 |
A | HIS155 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 2 |
Chain | Residue |
A | CYS137 |
A | SER140 |
A | HIS159 |
A | CYS165 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 3 |
Chain | Residue |
A | CYS186 |
A | CYS209 |
A | CYS213 |
A | CYS183 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 987 |
Chain | Residue |
A | GLY497 |
A | LYS498 |
A | THR499 |
A | VAL500 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 988 |
Chain | Residue |
A | GLY901 |
A | PRO902 |
A | ARG907 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 989 |
Chain | Residue |
A | MET357 |
A | SER523 |
A | ASN524 |
A | ILE525 |
A | ARG549 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 990 |
Chain | Residue |
A | PRO494 |
A | GLN665 |
A | ARG703 |
A | GLY831 |
A | ARG865 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 991 |
Chain | Residue |
A | TYR764 |
A | ARG843 |
A | HIS847 |
A | GLN848 |
A | GLY849 |
site_id | AC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE SO4 A 992 |
site_id | BC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE SO4 A 993 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 994 |
Chain | Residue |
A | ASN472 |
A | HIS473 |
site_id | BC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 995 |
Chain | Residue |
A | ARG462 |
A | PHE463 |
A | THR464 |
site_id | BC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 996 |
Chain | Residue |
A | THR794 |
A | PRO795 |
A | SER825 |
A | VAL826 |
A | ASP827 |
A | GLY851 |
A | PHE852 |
A | ARG858 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 997 |
Chain | Residue |
A | SER763 |
A | PRO795 |
A | TYR796 |
A | GLU797 |
A | ILE850 |
site_id | BC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 998 |
Chain | Residue |
A | THR418 |
A | ARG422 |
A | PRO623 |
site_id | BC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 999 |
Chain | Residue |
A | LEU544 |
A | CYS545 |
A | ALA546 |
A | GLU550 |
A | LEU561 |
A | HIS562 |
A | ARG624 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 1 |
Chain | Residue |
B | CYS123 |
B | CYS126 |
B | CYS145 |
B | HIS155 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 2 |
Chain | Residue |
B | CYS137 |
B | SER140 |
B | HIS159 |
B | CYS165 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 3 |
Chain | Residue |
B | CYS183 |
B | CYS186 |
B | CYS209 |
B | CYS213 |
site_id | CC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 B 989 |
Chain | Residue |
B | ASN472 |
B | HIS473 |
site_id | CC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 990 |
Chain | Residue |
B | GLY497 |
B | THR499 |
B | VAL500 |
site_id | CC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 991 |
Chain | Residue |
B | TYR764 |
B | ARG843 |
B | HIS847 |
B | GLN848 |
B | GLY849 |
site_id | CC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE SO4 B 992 |
site_id | CC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE SO4 B 993 |
site_id | CC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 995 |
Chain | Residue |
B | ARG462 |
B | PHE463 |
B | THR464 |
site_id | CC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 B 996 |
Chain | Residue |
B | THR794 |
B | PRO795 |
B | SER825 |
B | VAL826 |
B | ASP827 |
B | GLY851 |
B | PHE852 |
B | ARG858 |
site_id | CC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 997 |
Chain | Residue |
B | SER763 |
B | PRO795 |
B | TYR796 |
B | GLU797 |
B | ILE850 |
site_id | DC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 998 |
Chain | Residue |
B | SER523 |
B | ASN524 |
B | ILE525 |
B | ARG549 |
site_id | DC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 999 |
Chain | Residue |
B | PRO494 |
B | GLN665 |
B | ARG703 |
B | GLY831 |
B | ARG865 |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | CYS123 | |
A | CYS186 | |
A | CYS209 | |
A | CYS213 | |
B | CYS123 | |
B | CYS126 | |
B | CYS137 | |
B | SER140 | |
B | CYS145 | |
B | HIS155 | |
B | HIS159 | |
A | CYS126 | |
B | CYS165 | |
B | CYS183 | |
B | CYS186 | |
B | CYS209 | |
B | CYS213 | |
A | CYS137 | |
A | SER140 | |
A | CYS145 | |
A | HIS155 | |
A | HIS159 | |
A | CYS165 | |
A | CYS183 | |
Chain | Residue | Details |
A | PRO486 | |
A | ALA676 | |
A | SER713 | |
A | ALA844 | |
B | PRO486 | |
B | ALA676 | |
B | SER713 | |
B | ALA844 | |
Chain | Residue | Details |
A | VAL506 | |
B | VAL506 | |
Chain | Residue | Details |
A | ILE565 | |
B | ILE565 | |