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2WAD

PENICILLIN-BINDING PROTEIN 2B (PBP-2B) FROM STREPTOCOCCUS PNEUMONIAE (STRAIN 5204)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008360biological_processregulation of cell shape
A0008658molecular_functionpenicillin binding
A0009252biological_processpeptidoglycan biosynthetic process
A0016020cellular_componentmembrane
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
A0071972molecular_functionpeptidoglycan L,D-transpeptidase activity
B0005886cellular_componentplasma membrane
B0008360biological_processregulation of cell shape
B0008658molecular_functionpenicillin binding
B0009252biological_processpeptidoglycan biosynthetic process
B0016020cellular_componentmembrane
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
B0071972molecular_functionpeptidoglycan L,D-transpeptidase activity
C0005886cellular_componentplasma membrane
C0008360biological_processregulation of cell shape
C0008658molecular_functionpenicillin binding
C0009252biological_processpeptidoglycan biosynthetic process
C0016020cellular_componentmembrane
C0046677biological_processresponse to antibiotic
C0071555biological_processcell wall organization
C0071972molecular_functionpeptidoglycan L,D-transpeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 700
ChainResidue
AASP288
AHIS290
AASP292
BGLU472

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 701
ChainResidue
AHIS653
AHOH2253
AHOH2254
CLYS99
CGLU211

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 702
ChainResidue
AHIS676
AHOH2255
CGLU132

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 700
ChainResidue
BHIS290
BASP292
BHOH2200
CGLU472

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 701
ChainResidue
ALYS99
AGLU211
BHIS653
BHOH2201

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 702
ChainResidue
ALYS128
AGLU132
BHIS676
BHOH2202

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 700
ChainResidue
AGLU472
CASP288
CHIS290
CASP292

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 701
ChainResidue
BLYS99
BGLU211
CHIS653
CHOH2113

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN C 702
ChainResidue
CASP313
CHIS676

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues21
DetailsTOPO_DOM: Cytoplasmic => ECO:0000305
ChainResidueDetails
AMET1-SER8
BMET1-SER8
CMET1-SER8

site_idSWS_FT_FI2
Number of Residues60
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AILE9-GLY29
BILE9-GLY29
CILE9-GLY29

site_idSWS_FT_FI3
Number of Residues1950
DetailsTOPO_DOM: Extracellular => ECO:0000305
ChainResidueDetails
AARG30-ASN680
BARG30-ASN680
CARG30-ASN680

site_idSWS_FT_FI4
Number of Residues3
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000250|UniProtKB:P0AD65, ECO:0000305|PubMed:19233207
ChainResidueDetails
ASER386
BSER386
CSER386

218853

PDB entries from 2024-04-24

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