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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2VXM

Screening a Limited Structure-based Library Identifies UDP-GalNAc- Specific Mutants of alpha-1,3 Galactosyltransferase

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005975	biological_process	carbohydrate metabolic process
A	0016020	cellular_component	membrane
A	0016758	molecular_function	hexosyltransferase activity
B	0005975	biological_process	carbohydrate metabolic process
B	0016020	cellular_component	membrane
B	0016758	molecular_function	hexosyltransferase activity
C	0005975	biological_process	carbohydrate metabolic process
C	0016020	cellular_component	membrane
C	0016758	molecular_function	hexosyltransferase activity
D	0005975	biological_process	carbohydrate metabolic process
D	0016020	cellular_component	membrane
D	0016758	molecular_function	hexosyltransferase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL B 1340

Chain	Residue
B	MET100
B	HOH2026

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MPD B 1339

Chain	Residue
B	GLU96
B	TYR251
B	HOH2025
C	ARG138
C	HIS142
C	TYR143

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Active site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"11179209","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1G8O","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	28
Details	Binding site: {"evidences":[{"source":"PubMed","id":"11179209","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11592969","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12011052","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1G93","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GWV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GWW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GX0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GX4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K4V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VFZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VXL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGZ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"11179209","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11592969","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12011052","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1G8O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1G93","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GWV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GWW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GX0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GX4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K4V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VFZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VXL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGZ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	16
Details	Binding site: {"evidences":[{"source":"PubMed","id":"12011052","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1GWV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GX4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1O7Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VZX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VS4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGZ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	4
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

Catalytic Information from CSA

site_id	CSA1
Number of Residues	1
Details	Annotated By Reference To The Literature 1g8o

Chain	Residue	Details
A	GLU317

site_id	CSA2
Number of Residues	1
Details	Annotated By Reference To The Literature 1g8o

Chain	Residue	Details
B	GLU317

site_id	CSA3
Number of Residues	1
Details	Annotated By Reference To The Literature 1g8o

Chain	Residue	Details
C	GLU317

site_id	CSA4
Number of Residues	1
Details	Annotated By Reference To The Literature 1g8o

Chain	Residue	Details
D	GLU317

site_id	MCSA1
Number of Residues	4
Details	M-CSA 356

Chain	Residue	Details
A	GLN247	electrostatic stabiliser, hydrogen bond donor
A	ARG280	electrostatic stabiliser, hydrogen bond donor
A	TRP314	electrostatic stabiliser, hydrogen bond donor
A	GLU317	activator, covalently attached, electrostatic stabiliser, nucleofuge, nucleophile

site_id	MCSA2
Number of Residues	4
Details	M-CSA 356

Chain	Residue	Details
B	GLN247	electrostatic stabiliser, hydrogen bond donor
B	ARG280	electrostatic stabiliser, hydrogen bond donor
B	TRP314	electrostatic stabiliser, hydrogen bond donor
B	GLU317	activator, covalently attached, electrostatic stabiliser, nucleofuge, nucleophile

site_id	MCSA3
Number of Residues	4
Details	M-CSA 356

Chain	Residue	Details
C	GLN247	electrostatic stabiliser, hydrogen bond donor
C	ARG280	electrostatic stabiliser, hydrogen bond donor
C	TRP314	electrostatic stabiliser, hydrogen bond donor
C	GLU317	activator, covalently attached, electrostatic stabiliser, nucleofuge, nucleophile

site_id	MCSA4
Number of Residues	4
Details	M-CSA 356

Chain	Residue	Details
D	GLN247	electrostatic stabiliser, hydrogen bond donor
D	ARG280	electrostatic stabiliser, hydrogen bond donor
D	TRP314	electrostatic stabiliser, hydrogen bond donor
D	GLU317	activator, covalently attached, electrostatic stabiliser, nucleofuge, nucleophile

246905

PDB entries from 2025-12-31

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