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2VVT

Glutamate Racemase (MurI) from E. faecalis in complex with a 9-Benzyl Purine inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0008360biological_processregulation of cell shape
A0008881molecular_functionglutamate racemase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016853molecular_functionisomerase activity
A0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
A0042802molecular_functionidentical protein binding
A0047661molecular_functionamino-acid racemase activity
A0071555biological_processcell wall organization
B0008360biological_processregulation of cell shape
B0008881molecular_functionglutamate racemase activity
B0009252biological_processpeptidoglycan biosynthetic process
B0016853molecular_functionisomerase activity
B0016855molecular_functionracemase and epimerase activity, acting on amino acids and derivatives
B0042802molecular_functionidentical protein binding
B0047661molecular_functionamino-acid racemase activity
B0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE I24 A1269
ChainResidue
AVAL14
AHOH2313
AHOH2314
AVAL152
AGLU153
AASN155
AHIS187
ALEU190
AMET246
AILE250
AHOH2194

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE I24 B1269
ChainResidue
AASN197
AGLY200
ASER201
AHIS202
AHOH2235
BVAL152
BGLU153
BASN155
BGLU249
BILE250
BHOH2355
BHOH2386

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DGL A1270
ChainResidue
AASP11
ASER12
APRO42
ATYR43
AGLY44
ACYS74
AASN75
ATHR76
ATHR118
ACYS185
ATHR186
AHOH2021
AHOH2230
AHOH2315

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DGL B1270
ChainResidue
BASP11
BSER12
BPRO42
BTYR43
BGLY44
BCYS74
BASN75
BTHR76
BTHR118
BCYS185
BTHR186
BHIS187
BHOH2282
BHOH2388

Functional Information from PROSITE/UniProt
site_idPS00923
Number of Residues9
DetailsASP_GLU_RACEMASE_1 Aspartate and glutamate racemases signature 1. VIaC.NTATA
ChainResidueDetails
AVAL71-ALA79

site_idPS00924
Number of Residues11
DetailsASP_GLU_RACEMASE_2 Aspartate and glutamate racemases signature 2. LIlGCTHYPlL
ChainResidueDetails
ALEU181-LEU191

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"UniProtKB","id":"O58403","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00258","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17568739","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18614367","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2JFO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JFP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VVT","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1b73
ChainResidueDetails
ACYS185
ACYS74
AASP11
ASER12

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1b73
ChainResidueDetails
BCYS185
BCYS74
BASP11
BSER12

248636

PDB entries from 2026-02-04

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