2VM9

Native structure of the recombinant discoidin II of Dictyostelium discoideum at 1.75 angstrom

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0007010	biological_process	cytoskeleton organization
A	0007155	biological_process	cell adhesion
A	0009617	biological_process	response to bacterium
A	0009986	cellular_component	cell surface
A	0016936	molecular_function	galactoside binding
A	0030246	molecular_function	carbohydrate binding
A	0030247	molecular_function	polysaccharide binding
A	0031012	cellular_component	extracellular matrix
A	0031160	cellular_component	spore wall
A	0031982	cellular_component	vesicle
A	0045335	cellular_component	phagocytic vesicle
A	0046871	molecular_function	N-acetylgalactosamine binding
A	0046872	molecular_function	metal ion binding
A	0070492	molecular_function	oligosaccharide binding
A	0098609	biological_process	cell-cell adhesion
A	0098636	cellular_component	protein complex involved in cell adhesion
A	0140582	biological_process	adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE CA A 500

Chain	Residue
A	ASN39
A	SER40
A	ASP47
A	HOH2070
A	HOH2072
A	HOH2088
A	HOH2091

---

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MPD A 502

Chain	Residue
A	GLN86
A	HIS144
A	PO4507
A	HOH2362
A	HOH2363
A	TYR24
A	ARG81

---

site_id	AC3
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MPD A 503

Chain	Residue
A	ASP85
A	GLN86
A	THR140
A	ASN143
A	CL511
A	HOH2363
A	HOH2364
A	HOH2365

---

site_id	AC4
Number of Residues	9
Details	BINDING SITE FOR RESIDUE PO4 A 505

Chain	Residue
A	VAL208
A	VAL208
A	VAL208
A	MET217
A	MET217
A	MET217
A	TRP219
A	TRP219
A	TRP219

---

site_id	AC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE PO4 A 506

Chain	Residue
A	SER7
A	HOH2366

---

site_id	AC6
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PO4 A 507

Chain	Residue
A	HIS28
A	PHE46
A	ARG81
A	MPD502
A	HOH2367
A	HOH2368
A	HOH2369
A	HOH2370

---

site_id	AC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CL A 509

Chain	Residue
A	GLY239
A	HOH2052

---

site_id	AC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CL A 510

Chain	Residue
A	ASP58
A	LYS59
A	HOH2039
A	HOH2097

---

site_id	AC9
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CL A 511

Chain	Residue
A	HIS84
A	ASP85
A	ARG117
A	MPD503
A	HOH2365

---

Functional Information from PROSITE/UniProt

site_id	PS01285
Number of Residues	30
Details	FA58C_1 Coagulation factors 5/8 type C domain (FA58C) signature 1. SWsssvldknq......FIvAGsdsvkhFvaIsTQG

Chain	Residue	Details
A	SER51-GLY80

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	144
Details	Domain: {"description":"F5/8 type C","evidences":[{"source":"PROSITE-ProRule","id":"PRU00081","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	6
Details	Region: {"description":"Linker"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	94
Details	Region: {"description":"Lectin-like"}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Motif: {"description":"Cell attachment site","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	6
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	Modified residue: {"description":"Phosphohistidine","evidences":[{"source":"PubMed","id":"18384150","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---