2VL8

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF LETHAL TOXIN FROM CLOSTRIDIUM SORDELLII IN COMPLEX WITH UDP, CASTANOSPERMINE AND CALCIUM ION

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0016757	molecular_function	glycosyltransferase activity
B	0016757	molecular_function	glycosyltransferase activity
C	0016757	molecular_function	glycosyltransferase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	15
Details	BINDING SITE FOR RESIDUE UDP A1543

Chain	Residue
A	ILE101
A	ASP288
A	SER518
A	CTS1544
A	CA1545
A	HOH2138
A	HOH2139
A	TRP102
A	ILE103
A	ASN139
A	LEU265
A	SER269
A	TYR284
A	ASP286
A	VAL287

---

site_id	AC2
Number of Residues	8
Details	BINDING SITE FOR RESIDUE CTS A1544

Chain	Residue
A	ALA266
A	ASP270
A	ARG273
A	ASP286
A	ILE383
A	ASN384
A	THR465
A	UDP1543

---

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CA A1545

Chain	Residue
A	ASP288
A	GLU515
A	SER518
A	UDP1543
A	HOH2077

---

site_id	AC4
Number of Residues	14
Details	BINDING SITE FOR RESIDUE UDP B1543

Chain	Residue
B	ILE101
B	TRP102
B	ILE103
B	ASN139
B	LEU265
B	SER269
B	TYR284
B	ASP286
B	VAL287
B	ASP288
B	SER518
B	CTS1544
B	CA1545
B	HOH2129

---

site_id	AC5
Number of Residues	9
Details	BINDING SITE FOR RESIDUE CTS B1544

Chain	Residue
B	ALA266
B	ASP270
B	ARG273
B	ASP286
B	ILE383
B	ASN384
B	THR465
B	GLY470
B	UDP1543

---

site_id	AC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CA B1545

Chain	Residue
B	ASP288
B	GLU515
B	SER518
B	UDP1543
B	HOH2081

---

site_id	AC7
Number of Residues	14
Details	BINDING SITE FOR RESIDUE UDP C1543

Chain	Residue
C	ILE101
C	TRP102
C	ILE103
C	ASN139
C	LEU265
C	SER269
C	TYR284
C	ASP286
C	VAL287
C	ASP288
C	SER518
C	CTS1544
C	CA1545
C	HOH2132

---

site_id	AC8
Number of Residues	10
Details	BINDING SITE FOR RESIDUE CTS C1544

Chain	Residue
C	ALA266
C	ASP270
C	ARG273
C	ASP286
C	ILE383
C	ASN384
C	GLN385
C	THR465
C	GLY470
C	UDP1543

---

site_id	AC9
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CA C1545

Chain	Residue
C	ASP288
C	GLU515
C	SER518
C	UDP1543
C	HOH2076

---

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CA A1546

Chain	Residue
A	ASP280
A	HOH2074
B	GLU219

---

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CA A1547

Chain	Residue
A	GLU219
C	ASP280

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1116
Details	Domain: {"description":"GT44","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	180
Details	Region: {"description":"Four-helical bundle","evidences":[{"source":"PubMed","id":"27023605","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1116
Details	Region: {"description":"Glucosyltransferase region","evidences":[{"source":"PubMed","id":"29146177","evidenceCode":"ECO:0000303"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	30
Details	Binding site: {"evidences":[{"source":"PubMed","id":"18325534","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18505687","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2VKD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VKH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VL8","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	10
Details	Binding site: {"evidences":[{"source":"PubMed","id":"18325534","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2VKD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VKH","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"PubMed","id":"18325534","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18505687","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2VKH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VL8","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---