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2VF6

Human FDPS synthase in complex with minodronate

Functional Information from GO Data
ChainGOidnamespacecontents
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE M0N A1351
ChainResidue
APHE99
AGLN240
AASP243
ALYS257
AMG1352
AMG1353
AMG1354
AHOH2044
AHOH2049
AHOH2114
AHOH2117
AASP103
AHOH2119
AHOH2122
AHOH2167
AHOH2168
AHOH2169
AHOH2170
AHOH2171
AASP107
AARG112
ATHR167
AGLN171
ALYS200
ATHR201
ATYR204

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A1352
ChainResidue
AASP243
AM0N1351
AHOH2117
AHOH2119
AHOH2122

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A1353
ChainResidue
AASP103
AASP107
AM0N1351
AMG1354
AHOH2044
AHOH2049

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A1354
ChainResidue
AASP103
AASP107
AM0N1351
AMG1353
AHOH2050
AHOH2169
AHOH2170

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
AMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
ALEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16684881, ECO:0007744|PDB:1ZW5
ChainResidueDetails
AGLN162
AILE169
ALEU173
APRO179
AGLY123
ALEU126

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
ASER323
AALA178
ALYS266
ACYS267
AGLU306

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATYR332

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Important for determining product chain length => ECO:0000250
ChainResidueDetails
ATYR165
ASER164

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
AGLY123

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS353

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PDB entries from 2024-06-12

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