2VDU
Structure of trm8-trm82, THE YEAST TRNA m7G methylation complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006400 | biological_process | tRNA modification |
| B | 0008033 | biological_process | tRNA processing |
| B | 0008047 | molecular_function | enzyme activator activity |
| B | 0030488 | biological_process | tRNA methylation |
| B | 0036265 | biological_process | RNA (guanine-N7)-methylation |
| B | 0043527 | cellular_component | tRNA methyltransferase complex |
| B | 0106004 | biological_process | tRNA (guanine-N7)-methylation |
| B | 0106143 | cellular_component | tRNA (m7G46) methyltransferase complex |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005654 | cellular_component | nucleoplasm |
| D | 0005829 | cellular_component | cytosol |
| D | 0006400 | biological_process | tRNA modification |
| D | 0008033 | biological_process | tRNA processing |
| D | 0008047 | molecular_function | enzyme activator activity |
| D | 0030488 | biological_process | tRNA methylation |
| D | 0036265 | biological_process | RNA (guanine-N7)-methylation |
| D | 0043527 | cellular_component | tRNA methyltransferase complex |
| D | 0106004 | biological_process | tRNA (guanine-N7)-methylation |
| D | 0106143 | cellular_component | tRNA (m7G46) methyltransferase complex |
| E | 0006400 | biological_process | tRNA modification |
| E | 0008176 | molecular_function | tRNA (guanine(46)-N7)-methyltransferase activity |
| F | 0006400 | biological_process | tRNA modification |
| F | 0008176 | molecular_function | tRNA (guanine(46)-N7)-methyltransferase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE PO4 E1287 |
| Chain | Residue |
| E | HIS225 |
| E | ARG240 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 F1287 |
| Chain | Residue |
| F | HIS225 |
| F | ARG240 |
| F | HOH2049 |
| F | HOH2050 |
| F | HOH2051 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 94 |
| Details | Repeat: {"description":"WD 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 88 |
| Details | Repeat: {"description":"WD 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 88 |
| Details | Repeat: {"description":"WD 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 82 |
| Details | Repeat: {"description":"WD 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 92 |
| Details | Repeat: {"description":"WD 7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Active site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03055","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18184583","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | Binding site: {} |
| Chain | Residue | Details |
