Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VBV

Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and FMN

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0008531molecular_functionriboflavin kinase activity
A0009231biological_processriboflavin biosynthetic process
A0009398biological_processFMN biosynthetic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0008531molecular_functionriboflavin kinase activity
B0009231biological_processriboflavin biosynthetic process
B0009398biological_processFMN biosynthetic process
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CDP A1135
ChainResidue
ASER13
ALEU44
AASN45
AMET112
ALYS113
ALEU114
AARG115
AMG1136
AFMN1140
AHOH2047
AHOH2048
AGLY14
AHOH2049
ALEU15
AGLY16
AGLY18
AARG19
ATYR40
AGLY42
ATHR43

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A1136
ChainResidue
ATHR43
AASN45
ACDP1135
AFMN1140

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE FMN A1140
ChainResidue
AGLY16
AGLU17
AGLY18
APHE21
ATHR43
AASN45
APHE72
APHE73
AVAL75
APRO96
ALYS98
ATHR99
ATYR100
AGLU107
ACDP1135
AMG1136
AHOH2050

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE CDP B1137
ChainResidue
BGLY14
BGLY16
BGLU17
BGLY18
BARG19
BTYR40
BGLY42
BTHR43
BLEU44
BASN45
BMET112
BLYS113
BLEU114
BARG115
BMG1136
BHOH2003
BHOH2004
BHOH2010

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A1138
ChainResidue
AASN68
AHIS101

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A1139
ChainResidue
ASER13
AASN68
AGLY69

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B1136
ChainResidue
BTHR43
BASN45
BCDP1137
BHOH2010

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|Ref.3
ChainResidueDetails
AGLY14
AMET112
BGLY14
BMET112

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:18073108
ChainResidueDetails
ATHR43
AASN45
BTHR43
BASN45

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING:
ChainResidueDetails
ATHR99
ATYR100
AGLU107
BTHR99
BTYR100
BGLU107

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon