2VBV
Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and FMN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.482, 73.299, 104.907 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.400 |
R-factor | 0.232 |
Rwork | 0.227 |
R-free | 0.32300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vbt |
RMSD bond length | 0.015 |
RMSD bond angle | 1.700 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.580 | 2.550 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.130 | 0.690 |
Number of reflections | 12903 | |
<I/σ(I)> | 8.67 | 2.25 |
Completeness [%] | 98.6 | 98.5 |
Redundancy | 5.5 | 5.62 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 20% W/V PEG 8000, 200 MM SODIUM IODIDE |