2V9J

Crystal structure of the regulatory fragment of mammalian AMPK in complexes with Mg.ATP-AMP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004679	molecular_function	AMP-activated protein kinase activity
E	0000166	molecular_function	nucleotide binding
E	0004679	molecular_function	AMP-activated protein kinase activity
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005634	cellular_component	nucleus
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0006110	biological_process	regulation of glycolytic process
E	0006629	biological_process	lipid metabolic process
E	0006631	biological_process	fatty acid metabolic process
E	0006633	biological_process	fatty acid biosynthetic process
E	0016208	molecular_function	AMP binding
E	0019887	molecular_function	protein kinase regulator activity
E	0019901	molecular_function	protein kinase binding
E	0031588	cellular_component	nucleotide-activated protein kinase complex
E	0031669	biological_process	cellular response to nutrient levels
E	0032991	cellular_component	protein-containing complex
E	0042149	biological_process	cellular response to glucose starvation
E	0043531	molecular_function	ADP binding
E	0044877	molecular_function	protein-containing complex binding
E	0045722	biological_process	positive regulation of gluconeogenesis
E	0050790	biological_process	regulation of catalytic activity
E	0051170	biological_process	import into nucleus

Functional Information from PDB Data

site_id	AC1
Number of Residues	21
Details	BINDING SITE FOR RESIDUE ATP E1327

Chain	Residue
E	ARG69
E	VAL275
E	LEU276
E	VAL296
E	HIS297
E	ARG298
E	LEU314
E	MG1330
E	HOH2074
E	HOH2075
E	HOH2076
E	ARG151
E	HOH2077
E	HOH2078
E	LYS169
E	ILE239
E	SER241
E	PHE243
E	ASP244
E	ARG268
E	PHE272

---

site_id	AC2
Number of Residues	17
Details	BINDING SITE FOR RESIDUE ATP E1328

Chain	Residue
E	MET84
E	THR86
E	ILE87
E	THR88
E	ASP89
E	PRO127
E	LEU128
E	VAL129
E	ILE149
E	HIS150
E	ARG151
E	PRO153
E	SER225
E	LYS242
E	MG1331
E	HOH2078
E	HOH2079

---

site_id	AC3
Number of Residues	15
Details	BINDING SITE FOR RESIDUE AMP E1329

Chain	Residue
A	ARG457
E	HIS150
E	THR199
E	ILE203
E	ALA204
E	VAL224
E	SER225
E	ALA226
E	HIS297
E	ILE311
E	SER313
E	SER315
E	ASP316
E	HOH2079
E	HOH2080

---

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG E1330

Chain	Residue
E	LYS169
E	ATP1327
E	HOH2074
E	HOH2077

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG E1331

Chain	Residue
E	ILE87
E	ATP1328
E	HOH2078

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q13131","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	60
Details	Domain: {"description":"CBS 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00703","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	62
Details	Domain: {"description":"CBS 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00703","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	62
Details	Domain: {"description":"CBS 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00703","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	21
Details	Motif: {"description":"AMPK pseudosubstrate"}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	16
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17851531","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2V92","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17851531","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21399626","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2V8Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y8L","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine; by ULK1","evidences":[{"source":"PubMed","id":"21460634","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	1
Details	Modified residue: {"description":"Phosphothreonine; by ULK1","evidences":[{"source":"PubMed","id":"21460634","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine; by ULK1","evidences":[{"source":"PubMed","id":"21460634","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---