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2V83

Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0005634cellular_componentnucleus
A0006310biological_processDNA recombination
B0003677molecular_functionDNA binding
B0005634cellular_componentnucleus
B0006310biological_processDNA recombination
C0003677molecular_functionDNA binding
C0005634cellular_componentnucleus
C0006310biological_processDNA recombination
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1486
ChainResidue
ACYS419
ACYS423
AHIS455
ACYS458

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1487
ChainResidue
ACYS446
AHIS452
ACYS478
AHIS481

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1488
ChainResidue
BCYS423
BHIS455
BCYS458
BCYS419

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1489
ChainResidue
BCYS446
BHIS452
BCYS478
BHIS481

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1484
ChainResidue
CCYS419
CCYS423
CHIS455
CCYS458

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 1485
ChainResidue
CCYS446
CHIS452
CCYS478
CHIS481

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues136
DetailsZinc finger: {"description":"PHD-type; atypical"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15964836","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18025461","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"5-glutamyl serotonin; alternate","evidences":[{"source":"UniProtKB","id":"P68431","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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