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2V08

Structure of wild-type Phormidium laminosum cytochrome c6

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0009055molecular_functionelectron transfer activity
A0009579cellular_componentthylakoid
A0015979biological_processphotosynthesis
A0020037molecular_functionheme binding
A0031977cellular_componentthylakoid lumen
A0031979cellular_componentplasma membrane-derived thylakoid lumen
A0046872molecular_functionmetal ion binding
B0005506molecular_functioniron ion binding
B0009055molecular_functionelectron transfer activity
B0009579cellular_componentthylakoid
B0015979biological_processphotosynthesis
B0020037molecular_functionheme binding
B0031977cellular_componentthylakoid lumen
B0031979cellular_componentplasma membrane-derived thylakoid lumen
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM A 1087
ChainResidue
AASN14
ALEU32
APHE40
AMET42
AGLN51
AVAL52
ALYS56
AALA57
AGLY58
AMET59
APRO60
ACYS15
AHOH2062
AHOH2063
AHOH2064
BALA17
ACYS18
AHIS19
AASN24
AVAL26
AASN27
ALYS30
ATHR31

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE IMD A 1088
ChainResidue
AASN24
ALEU25
ALEU25
AALA28
AZN1091
AZN1091
AZN1091
AHOH2018

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE IMD A 1089
ChainResidue
AGLU35
ATYR77
AGLN81
ATRP86
AZN1093
ACL1095
ACL1096
ACL1097

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM B 1087
ChainResidue
BASN14
BCYS15
BCYS18
BHIS19
BASN24
BASN27
BLYS30
BTHR31
BLEU32
BPHE40
BMET42
BGLN51
BLYS56
BMET59
BPHE62
BHOH2039
BHOH2040

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE IMD B 1088
ChainResidue
BASN24
BLEU25
BLEU25
BZN1090
BZN1090
BZN1090
BHOH2013

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IMD B 1089
ChainResidue
BGLU35
BTYR77
BGLN81
BTRP86
BZN1091

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1090
ChainResidue
AASN27
AGLU29
AHOH2065
AHOH2066

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1091
ChainResidue
AIMD1088
AIMD1088
AIMD1088
AHOH2067
AHOH2067
AHOH2067

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 1090
ChainResidue
BIMD1088
BIMD1088
BIMD1088
BHOH2041
BHOH2041
BHOH2041

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1091
ChainResidue
BIMD1089
BHOH2042
BHOH2043
BHOH2044

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1092
ChainResidue
AASP68
AASP68
AASP68
AHOH2068
AHOH2068
AHOH2068

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1093
ChainResidue
AIMD1089
ACL1095
ACL1096
ACL1097

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1092
ChainResidue
BGLU29
BHOH2045
BHOH2046
BASN27

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B 1093
ChainResidue
BGLU35
BTRP86

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 1094
ChainResidue
AGLU35
ATRP86
AHOH2069

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1095
ChainResidue
AGLY21
ATHR31
AIMD1089
AZN1093

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 1096
ChainResidue
APHE11
AGLY21
AIMD1089
AZN1093
ACL1097
AHOH2030

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 1097
ChainResidue
AGLU35
AALA36
ALYS39
AIMD1089
AZN1093
ACL1096

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PDB entries from 2024-11-06

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