2UU9
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015935 | cellular_component | small ribosomal subunit |
| B | 0019843 | molecular_function | rRNA binding |
| B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003729 | molecular_function | mRNA binding |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0019843 | molecular_function | rRNA binding |
| C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0015935 | cellular_component | small ribosomal subunit |
| D | 0019843 | molecular_function | rRNA binding |
| D | 0042274 | biological_process | ribosomal small subunit biogenesis |
| D | 0046872 | molecular_function | metal ion binding |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0015935 | cellular_component | small ribosomal subunit |
| E | 0019843 | molecular_function | rRNA binding |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0003723 | molecular_function | RNA binding |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0019843 | molecular_function | rRNA binding |
| F | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0000049 | molecular_function | tRNA binding |
| G | 0003723 | molecular_function | RNA binding |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 0015935 | cellular_component | small ribosomal subunit |
| G | 0019843 | molecular_function | rRNA binding |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003723 | molecular_function | RNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005840 | cellular_component | ribosome |
| H | 0006412 | biological_process | translation |
| H | 0019843 | molecular_function | rRNA binding |
| H | 1990904 | cellular_component | ribonucleoprotein complex |
| I | 0000049 | molecular_function | tRNA binding |
| I | 0003723 | molecular_function | RNA binding |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 0015935 | cellular_component | small ribosomal subunit |
| I | 0019843 | molecular_function | rRNA binding |
| I | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0000049 | molecular_function | tRNA binding |
| J | 0003723 | molecular_function | RNA binding |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005840 | cellular_component | ribosome |
| J | 0006412 | biological_process | translation |
| J | 0019843 | molecular_function | rRNA binding |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0003723 | molecular_function | RNA binding |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0019843 | molecular_function | rRNA binding |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0000049 | molecular_function | tRNA binding |
| L | 0003723 | molecular_function | RNA binding |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0015935 | cellular_component | small ribosomal subunit |
| L | 0019843 | molecular_function | rRNA binding |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| M | 0000049 | molecular_function | tRNA binding |
| M | 0003676 | molecular_function | nucleic acid binding |
| M | 0003723 | molecular_function | RNA binding |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005829 | cellular_component | cytosol |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 0015935 | cellular_component | small ribosomal subunit |
| M | 0019843 | molecular_function | rRNA binding |
| M | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003723 | molecular_function | RNA binding |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005840 | cellular_component | ribosome |
| N | 0006412 | biological_process | translation |
| N | 0008270 | molecular_function | zinc ion binding |
| N | 0015935 | cellular_component | small ribosomal subunit |
| N | 0019843 | molecular_function | rRNA binding |
| N | 0046872 | molecular_function | metal ion binding |
| N | 1990904 | cellular_component | ribonucleoprotein complex |
| O | 0003723 | molecular_function | RNA binding |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005737 | cellular_component | cytoplasm |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0019843 | molecular_function | rRNA binding |
| O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005737 | cellular_component | cytoplasm |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0015935 | cellular_component | small ribosomal subunit |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0003723 | molecular_function | RNA binding |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0019843 | molecular_function | rRNA binding |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 0003723 | molecular_function | RNA binding |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 0019843 | molecular_function | rRNA binding |
| R | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| S | 0000028 | biological_process | ribosomal small subunit assembly |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| S | 0015935 | cellular_component | small ribosomal subunit |
| S | 0019843 | molecular_function | rRNA binding |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0003723 | molecular_function | RNA binding |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0015935 | cellular_component | small ribosomal subunit |
| T | 0019843 | molecular_function | rRNA binding |
| T | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| U | 0003723 | molecular_function | RNA binding |
| U | 0005840 | cellular_component | ribosome |
| U | 0019843 | molecular_function | rRNA binding |
| U | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | binding site for residue PAR A 1601 |
| Chain | Residue |
| A | G1405 |
| A | K1787 |
| A | C1407 |
| A | A1408 |
| A | C1490 |
| A | G1491 |
| A | A1492 |
| A | A1493 |
| A | G1494 |
| A | U1495 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1602 |
| Chain | Residue |
| A | C701 |
| A | G703 |
| A | C1452 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1603 |
| Chain | Residue |
| A | G156 |
| A | G157 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1604 |
| Chain | Residue |
| A | K1763 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1605 |
| Chain | Residue |
| A | A1499 |
| A | A1500 |
| A | G1508 |
| A | G1521 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1607 |
| Chain | Residue |
| A | C519 |
| A | A520 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1610 |
| Chain | Residue |
| A | G724 |
| A | G725 |
| A | G854 |
| A | G855 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1611 |
| Chain | Residue |
| A | G581 |
| A | G758 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1612 |
| Chain | Residue |
| A | G492 |
| site_id | AD1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1613 |
| Chain | Residue |
| A | G309 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1614 |
| Chain | Residue |
| A | G592 |
| A | G593 |
| A | U646 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1615 |
| Chain | Residue |
| A | G660 |
| A | G661 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1616 |
| Chain | Residue |
| A | G260 |
| A | U261 |
| A | U264 |
| T | ARG83 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1617 |
| Chain | Residue |
| A | C58 |
| A | U387 |
| A | G388 |
| site_id | AD6 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1618 |
| Chain | Residue |
| A | G11 |
| A | U12 |
| A | G21 |
| A | G22 |
| A | C23 |
| site_id | AD7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1619 |
| Chain | Residue |
| A | K1770 |
| site_id | AD8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1620 |
| Chain | Residue |
| A | A665 |
| A | G666 |
| A | G667 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1621 |
| Chain | Residue |
| A | C882 |
| A | C883 |
| site_id | AE1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1622 |
| Chain | Residue |
| A | C48 |
| A | G115 |
| site_id | AE2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1624 |
| Chain | Residue |
| A | G297 |
| A | G299 |
| site_id | AE3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1625 |
| Chain | Residue |
| A | A583 |
| A | G584 |
| A | G758 |
| site_id | AE4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1626 |
| Chain | Residue |
| A | G1432 |
| site_id | AE5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1627 |
| Chain | Residue |
| A | A729 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1628 |
| Chain | Residue |
| A | G976 |
| A | U1358 |
| A | C1359 |
| site_id | AE7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1629 |
| Chain | Residue |
| A | G376 |
| A | G377 |
| site_id | AE8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1630 |
| Chain | Residue |
| A | G941 |
| site_id | AE9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1631 |
| Chain | Residue |
| A | G438 |
| A | U494 |
| site_id | AF1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1632 |
| Chain | Residue |
| A | C749 |
| A | G750 |
| site_id | AF2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1633 |
| Chain | Residue |
| A | G685 |
| site_id | AF3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1635 |
| Chain | Residue |
| A | A766 |
| A | C812 |
| site_id | AF4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1636 |
| Chain | Residue |
| A | U772 |
| site_id | AF5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1637 |
| Chain | Residue |
| A | G773 |
| A | G774 |
| site_id | AF6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1638 |
| Chain | Residue |
| A | A777 |
| site_id | AF7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1639 |
| Chain | Residue |
| A | A780 |
| A | G800 |
| site_id | AF8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1640 |
| Chain | Residue |
| A | G576 |
| A | C578 |
| site_id | AF9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1641 |
| Chain | Residue |
| A | MG1740 |
| site_id | AG1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1642 |
| Chain | Residue |
| A | G362 |
| site_id | AG2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1643 |
| Chain | Residue |
| A | C454 |
| site_id | AG3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1644 |
| Chain | Residue |
| A | C458 |
| A | G460 |
| A | C470 |
| site_id | AG4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1645 |
| Chain | Residue |
| A | C508 |
| A | A509 |
| A | A510 |
| site_id | AG5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1646 |
| Chain | Residue |
| A | U560 |
| A | C562 |
| site_id | AG6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1648 |
| Chain | Residue |
| A | C48 |
| A | U49 |
| A | G115 |
| site_id | AG7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1649 |
| Chain | Residue |
| A | G597 |
| A | U598 |
| A | G595 |
| A | C596 |
| site_id | AG8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1650 |
| Chain | Residue |
| A | G874 |
| site_id | AG9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1651 |
| Chain | Residue |
| A | G858 |
| A | G869 |
| site_id | AH1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1652 |
| Chain | Residue |
| A | A964 |
| A | G1198 |
| A | U1199 |
| site_id | AH2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1654 |
| Chain | Residue |
| A | A860 |
| site_id | AH3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1655 |
| Chain | Residue |
| A | G638 |
| site_id | AH4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1656 |
| Chain | Residue |
| A | G885 |
| A | G886 |
| A | U911 |
| A | MG1682 |
| site_id | AH5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1658 |
| Chain | Residue |
| A | A937 |
| site_id | AH6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1659 |
| Chain | Residue |
| A | C934 |
| A | U1345 |
| site_id | AH7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1660 |
| Chain | Residue |
| A | C962 |
| site_id | AH8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1662 |
| Chain | Residue |
| A | G1370 |
| site_id | AH9 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1666 |
| Chain | Residue |
| A | A563 |
| A | C564 |
| A | U565 |
| A | G567 |
| site_id | AI1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1667 |
| Chain | Residue |
| A | G682 |
| site_id | AI2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1669 |
| Chain | Residue |
| A | U1351 |
| site_id | AI3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1671 |
| Chain | Residue |
| A | G1294 |
| A | G1295 |
| site_id | AI4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1672 |
| Chain | Residue |
| A | G1441 |
| T | THR35 |
| site_id | AI5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1673 |
| Chain | Residue |
| A | G1461 |
| A | G1462 |
| site_id | AI6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1674 |
| Chain | Residue |
| A | G1435 |
| A | G1464 |
| A | C1465 |
| site_id | AI7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1675 |
| Chain | Residue |
| A | G1469 |
| A | G1470 |
| site_id | AI8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1676 |
| Chain | Residue |
| A | A915 |
| site_id | AI9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1677 |
| Chain | Residue |
| A | G324 |
| site_id | AJ1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1678 |
| Chain | Residue |
| A | G650 |
| site_id | AJ2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1679 |
| Chain | Residue |
| A | G594 |
| site_id | AJ3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1680 |
| Chain | Residue |
| A | A608 |
| site_id | AJ4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1681 |
| Chain | Residue |
| A | G700 |
| site_id | AJ5 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1682 |
| Chain | Residue |
| A | G887 |
| A | G888 |
| A | MG1656 |
| A | MG1744 |
| site_id | AJ6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1683 |
| Chain | Residue |
| A | A53 |
| site_id | AJ7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1684 |
| Chain | Residue |
| A | U1065 |
| A | C1066 |
| site_id | AJ8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1685 |
| Chain | Residue |
| A | A865 |
| A | C866 |
| A | G1079 |
| site_id | AJ9 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1686 |
| Chain | Residue |
| A | A1067 |
| A | G1068 |
| A | G1094 |
| A | G1387 |
| site_id | AK1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1687 |
| Chain | Residue |
| A | U1083 |
| A | U1086 |
| site_id | AK2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1689 |
| Chain | Residue |
| A | G1266 |
| A | A1268 |
| site_id | AK3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1690 |
| Chain | Residue |
| A | G903 |
| site_id | AK4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1691 |
| Chain | Residue |
| A | G963 |
| site_id | AK5 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1692 |
| Chain | Residue |
| A | C924 |
| A | G925 |
| A | G927 |
| A | U1390 |
| A | U1391 |
| site_id | AK6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1695 |
| Chain | Residue |
| A | U421 |
| site_id | AK7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1697 |
| Chain | Residue |
| A | A1499 |
| A | A1500 |
| A | G1504 |
| A | G1505 |
| site_id | AK8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1698 |
| Chain | Residue |
| A | A101 |
| site_id | AK9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1700 |
| Chain | Residue |
| A | U37 |
| A | G38 |
| site_id | AL1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1701 |
| Chain | Residue |
| A | A8 |
| site_id | AL2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1702 |
| Chain | Residue |
| A | G139 |
| site_id | AL3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1705 |
| Chain | Residue |
| A | U180 |
| A | G181 |
| A | A195 |
| site_id | AL4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1706 |
| Chain | Residue |
| A | U190 |
| A | G191 |
| site_id | AL5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1707 |
| Chain | Residue |
| A | G189 |
| site_id | AL6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1708 |
| Chain | Residue |
| A | A1238 |
| A | A1299 |
| A | C1335 |
| site_id | AL7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1710 |
| Chain | Residue |
| A | C352 |
| site_id | AL8 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1711 |
| Chain | Residue |
| A | C372 |
| A | U375 |
| A | G376 |
| A | U387 |
| site_id | AL9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1712 |
| Chain | Residue |
| A | G410 |
| site_id | AM1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1713 |
| Chain | Residue |
| A | U705 |
| A | A706 |
| site_id | AM2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1714 |
| Chain | Residue |
| A | C808 |
| site_id | AM3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1715 |
| Chain | Residue |
| A | A782 |
| A | A794 |
| site_id | AM4 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1717 |
| Chain | Residue |
| A | G1053 |
| A | G1058 |
| A | C1059 |
| A | G1198 |
| A | U1199 |
| site_id | AM5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1718 |
| Chain | Residue |
| A | C1389 |
| site_id | AM6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1720 |
| Chain | Residue |
| A | G21 |
| A | A573 |
| site_id | AM7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1721 |
| Chain | Residue |
| A | A116 |
| A | G117 |
| A | G289 |
| site_id | AM8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1722 |
| Chain | Residue |
| A | A768 |
| site_id | AM9 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1723 |
| Chain | Residue |
| A | U12 |
| A | U13 |
| A | C526 |
| A | G527 |
| A | A914 |
| site_id | AN1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1724 |
| Chain | Residue |
| A | A572 |
| A | A573 |
| A | A574 |
| site_id | AN2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1725 |
| Chain | Residue |
| A | U1095 |
| A | G1108 |
| site_id | AN3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1726 |
| Chain | Residue |
| A | G1224 |
| site_id | AN4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1727 |
| Chain | Residue |
| A | G587 |
| A | G588 |
| site_id | AN5 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1728 |
| Chain | Residue |
| A | A1500 |
| A | G1504 |
| A | G1505 |
| A | A1507 |
| A | G1508 |
| site_id | AN6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1729 |
| Chain | Residue |
| A | C972 |
| site_id | AN7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1730 |
| Chain | Residue |
| A | C795 |
| A | C796 |
| A | U1506 |
| site_id | AN8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1731 |
| Chain | Residue |
| A | A109 |
| A | A329 |
| A | G331 |
| site_id | AN9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1732 |
| Chain | Residue |
| A | U1083 |
| E | ARG27 |
| site_id | AO1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1733 |
| Chain | Residue |
| A | C328 |
| A | A329 |
| A | C330 |
| site_id | AO2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1734 |
| Chain | Residue |
| A | A1110 |
| A | C1189 |
| site_id | AO3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1735 |
| Chain | Residue |
| A | C970 |
| site_id | AO4 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1736 |
| Chain | Residue |
| A | U1510 |
| A | G1511 |
| A | U1512 |
| A | G1523 |
| A | C1524 |
| site_id | AO5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1737 |
| Chain | Residue |
| A | U12 |
| A | G21 |
| A | G22 |
| site_id | AO6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1738 |
| Chain | Residue |
| A | U788 |
| A | U789 |
| A | A792 |
| site_id | AO7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1739 |
| Chain | Residue |
| A | G604 |
| A | U605 |
| A | G633 |
| A | C634 |
| site_id | AO8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1740 |
| Chain | Residue |
| A | G852 |
| A | G853 |
| A | MG1641 |
| site_id | AO9 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1741 |
| Chain | Residue |
| A | G830 |
| A | U831 |
| A | G855 |
| A | C856 |
| site_id | AP1 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1742 |
| Chain | Residue |
| A | G107 |
| A | G324 |
| A | A325 |
| A | G326 |
| site_id | AP2 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1743 |
| Chain | Residue |
| A | C1066 |
| A | A1067 |
| A | G1386 |
| A | G1387 |
| site_id | AP3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1744 |
| Chain | Residue |
| A | G888 |
| A | MG1682 |
| site_id | AP4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1745 |
| Chain | Residue |
| A | G1417 |
| A | G1482 |
| site_id | AP5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1746 |
| Chain | Residue |
| A | C1303 |
| A | G1304 |
| A | G1305 |
| site_id | AP6 |
| Number of Residues | 7 |
| Details | binding site for residue MG A 1747 |
| Chain | Residue |
| A | C121 |
| A | G124 |
| A | U125 |
| A | G126 |
| A | C235 |
| A | G236 |
| A | C237 |
| site_id | AP7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1748 |
| Chain | Residue |
| A | G61 |
| A | U62 |
| A | G105 |
| site_id | AP8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 1749 |
| Chain | Residue |
| A | A572 |
| site_id | AP9 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1750 |
| Chain | Residue |
| A | U943 |
| A | G944 |
| A | U1232 |
| A | G1233 |
| site_id | AQ1 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1751 |
| Chain | Residue |
| A | U1073 |
| A | G1074 |
| A | G1082 |
| A | U1083 |
| site_id | AQ2 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1752 |
| Chain | Residue |
| A | C817 |
| A | G818 |
| A | C1527 |
| A | U1528 |
| site_id | AQ3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1753 |
| Chain | Residue |
| A | G1224 |
| A | A1324 |
| A | C1363 |
| site_id | AQ4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 1754 |
| Chain | Residue |
| A | G145 |
| A | G146 |
| site_id | AQ5 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1755 |
| Chain | Residue |
| A | C518 |
| A | G530 |
| L | PRO48 |
| X | G3 |
| site_id | AQ6 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1756 |
| Chain | Residue |
| A | G293 |
| A | U304 |
| A | G305 |
| site_id | AQ7 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1757 |
| Chain | Residue |
| A | U133 |
| A | U229 |
| A | G230 |
| site_id | AQ8 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1758 |
| Chain | Residue |
| A | C866 |
| A | G867 |
| site_id | AQ9 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1759 |
| Chain | Residue |
| A | G577 |
| A | U813 |
| site_id | AR1 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1760 |
| Chain | Residue |
| A | G895 |
| site_id | AR2 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1761 |
| Chain | Residue |
| A | C291 |
| A | U304 |
| A | G305 |
| site_id | AR3 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1762 |
| Chain | Residue |
| A | G576 |
| A | G577 |
| site_id | AR4 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1763 |
| Chain | Residue |
| A | MG1604 |
| site_id | AR5 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1764 |
| Chain | Residue |
| A | C934 |
| A | C936 |
| A | G1343 |
| site_id | AR6 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1765 |
| Chain | Residue |
| A | U14 |
| A | U17 |
| site_id | AR7 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1766 |
| Chain | Residue |
| A | A535 |
| A | G538 |
| site_id | AR8 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1767 |
| Chain | Residue |
| A | G741 |
| A | G742 |
| site_id | AR9 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1768 |
| Chain | Residue |
| A | G406 |
| A | A495 |
| site_id | AS1 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1769 |
| Chain | Residue |
| A | G593 |
| A | G595 |
| site_id | AS2 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1770 |
| Chain | Residue |
| A | G473 |
| A | G474 |
| A | MG1619 |
| site_id | AS3 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1771 |
| Chain | Residue |
| A | G557 |
| A | G558 |
| site_id | AS4 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1772 |
| Chain | Residue |
| A | G1185 |
| A | G1186 |
| A | K1789 |
| site_id | AS5 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1773 |
| Chain | Residue |
| A | G688 |
| A | G700 |
| site_id | AS6 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1774 |
| Chain | Residue |
| A | U129 |
| A | G231 |
| A | G232 |
| site_id | AS7 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1775 |
| Chain | Residue |
| A | A1236 |
| A | C1352 |
| U | LYS3 |
| site_id | AS8 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1776 |
| Chain | Residue |
| A | G490 |
| A | G491 |
| site_id | AS9 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1777 |
| Chain | Residue |
| A | G226 |
| A | G227 |
| site_id | AT1 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1778 |
| Chain | Residue |
| A | U1381 |
| G | ARG78 |
| site_id | AT2 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1779 |
| Chain | Residue |
| A | G928 |
| site_id | AT3 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1780 |
| Chain | Residue |
| A | A802 |
| site_id | AT4 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1782 |
| Chain | Residue |
| A | U304 |
| site_id | AT5 |
| Number of Residues | 3 |
| Details | binding site for residue K A 1783 |
| Chain | Residue |
| A | A151 |
| A | G167 |
| A | G168 |
| site_id | AT6 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1784 |
| Chain | Residue |
| E | GLU83 |
| site_id | AT7 |
| Number of Residues | 4 |
| Details | binding site for residue K A 1785 |
| Chain | Residue |
| A | G515 |
| A | U516 |
| A | G517 |
| A | U531 |
| site_id | AT8 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1786 |
| Chain | Residue |
| A | G52 |
| A | A360 |
| site_id | AT9 |
| Number of Residues | 1 |
| Details | binding site for residue K A 1787 |
| Chain | Residue |
| A | PAR1601 |
| site_id | AU1 |
| Number of Residues | 2 |
| Details | binding site for residue K A 1789 |
| Chain | Residue |
| A | G1186 |
| A | K1772 |
| site_id | AU2 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1790 |
| Chain | Residue |
| A | C518 |
| A | G529 |
| L | PRO48 |
| L | ASN49 |
| site_id | AU3 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 1791 |
| Chain | Residue |
| A | U1330 |
| M | THR20 |
| M | ILE22 |
| M | TYR23 |
| M | ILE25 |
| site_id | AU4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 1792 |
| Chain | Residue |
| A | C1303 |
| A | G1304 |
| A | G1305 |
| U | ASP5 |
| site_id | AU5 |
| Number of Residues | 5 |
| Details | binding site for residue MG B 301 |
| Chain | Residue |
| B | GLU20 |
| B | ASP166 |
| B | ASP189 |
| B | ASP191 |
| B | ASP205 |
| site_id | AU6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN D 301 |
| Chain | Residue |
| D | CYS9 |
| D | CYS12 |
| D | CYS26 |
| D | CYS31 |
| site_id | AU7 |
| Number of Residues | 3 |
| Details | binding site for residue K E 202 |
| Chain | Residue |
| E | ASN65 |
| E | MET136 |
| E | ARG140 |
| site_id | AU8 |
| Number of Residues | 2 |
| Details | binding site for residue MG N 101 |
| Chain | Residue |
| A | A1204 |
| N | ALA2 |
| site_id | AU9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN N 102 |
| Chain | Residue |
| N | CYS24 |
| N | CYS27 |
| N | CYS40 |
| N | CYS43 |
| site_id | AV1 |
| Number of Residues | 3 |
| Details | binding site for residue MG Q 201 |
| Chain | Residue |
| Q | ASP13 |
| Q | MET15 |
| Q | GLU49 |
| site_id | AV2 |
| Number of Residues | 4 |
| Details | binding site for residue K R 201 |
| Chain | Residue |
| F | ALA99 |
| F | ASN100 |
| R | LYS23 |
| R | GLU62 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA |
| Chain | Residue | Details |
| G | ASP20-ALA46 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR |
| Chain | Residue | Details |
| H | GLY108-ARG125 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN |
| Chain | Residue | Details |
| K | ILE95-ASN117 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR |
| Chain | Residue | Details |
| L | LYS46-ARG53 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS |
| Chain | Residue | Details |
| Q | GLY54-SER66 |
| site_id | PS00057 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR |
| Chain | Residue | Details |
| R | ARG32-ARG55 |
| site_id | PS00063 |
| Number of Residues | 16 |
| Details | ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF |
| Chain | Residue | Details |
| R | LEU66-PHE81 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT |
| Chain | Residue | Details |
| S | ASN53-THR77 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL |
| Chain | Residue | Details |
| I | GLY67-LEU85 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT |
| Chain | Residue | Details |
| J | ALA27-THR42 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY |
| Chain | Residue | Details |
| O | LEU39-TYR69 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR |
| Chain | Residue | Details |
| N | ARG23-ARG45 |
| site_id | PS00548 |
| Number of Residues | 35 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG |
| Chain | Residue | Details |
| C | ALA163-GLY197 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV |
| Chain | Residue | Details |
| E | GLY23-VAL55 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV |
| Chain | Residue | Details |
| D | LEU97-VAL121 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ |
| Chain | Residue | Details |
| M | ARG88-GLN101 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG |
| Chain | Residue | Details |
| B | VAL7-GLY18 |
| site_id | PS01048 |
| Number of Residues | 10 |
| Details | RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA |
| Chain | Residue | Details |
| F | GLY44-ALA53 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 45 |
| Details | Coiled coil: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 68 |
| Details | Domain: {"description":"KH type-2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 62 |
| Details | Domain: {"description":"S4 RNA-binding"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"11866529","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 63 |
| Details | Domain: {"description":"S5 DRBM"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 51 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 21 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"source":"PubMed","id":"16287167","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25775268","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
