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2UDP

UDP-GALACTOSE 4-EPIMERASE COMPLEXED WITH UDP-PHENOL

Replaces:  1UDP
Functional Information from GO Data
ChainGOidnamespacecontents
A0003978molecular_functionUDP-glucose 4-epimerase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0006012biological_processgalactose metabolic process
A0009242biological_processcolanic acid biosynthetic process
A0016853molecular_functionisomerase activity
A0016857molecular_functionracemase and epimerase activity, acting on carbohydrates and derivatives
A0033499biological_processgalactose catabolic process via UDP-galactose
A0042802molecular_functionidentical protein binding
A0070403molecular_functionNAD+ binding
B0003978molecular_functionUDP-glucose 4-epimerase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0006012biological_processgalactose metabolic process
B0009242biological_processcolanic acid biosynthetic process
B0016853molecular_functionisomerase activity
B0016857molecular_functionracemase and epimerase activity, acting on carbohydrates and derivatives
B0033499biological_processgalactose catabolic process via UDP-galactose
B0042802molecular_functionidentical protein binding
B0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 411
ChainResidue
AGLN91
AHOH440
AHOH441
AHOH616
AHOH694
BHOH413

site_idAC2
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAD A 340
ChainResidue
AILE12
AASP31
AASN32
ALEU33
ACYS34
AASN35
ASER36
AGLY57
AASP58
AILE59
APHE80
AALA81
AGLY82
ALYS84
AASN99
ASER122
ASER123
ASER124
ATYR149
ALYS153
ATYR177
APHE178
AUPP341
AHOH352
AHOH368
AHOH420
AHOH422
AGLY7
AGLY10
ATYR11

site_idAC3
Number of Residues23
DetailsBINDING SITE FOR RESIDUE UPP A 341
ChainResidue
ALYS84
ATYR149
AASN179
AASN198
AASN199
ALEU200
AALA216
AILE217
APHE218
AGLY229
AARG231
ATYR233
AVAL269
AARG292
AASP295
ANAD340
AHOH427
AHOH429
AHOH492
AHOH494
AHOH511
AHOH550
AHOH551

site_idAC4
Number of Residues33
DetailsBINDING SITE FOR RESIDUE NAD B 340
ChainResidue
BGLY7
BGLY10
BTYR11
BILE12
BASP31
BASN32
BLEU33
BCYS34
BASN35
BSER36
BGLY57
BASP58
BILE59
BPHE80
BALA81
BGLY82
BLYS84
BASN99
BSER122
BSER123
BSER124
BTYR149
BLYS153
BTYR177
BPHE178
BUPP341
BHOH435
BHOH436
BHOH494
BHOH496
BHOH521
BHOH609
BHOH726

site_idAC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE UPP B 341
ChainResidue
BILE217
BPHE218
BGLY229
BARG231
BTYR233
BARG292
BASP295
BTYR299
BNAD340
BHOH497
BHOH553
BHOH583
BHOH595
BHOH663
BHOH672
BVAL86
BASN179
BASN198
BASN199
BLEU200
BLEU215
BALA216

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 410
ChainResidue
AALA208
BTHR315
BGLU320
BHOH678

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:8611497
ChainResidueDetails
ATYR149
BTYR149

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:12019271, ECO:0000269|PubMed:1579570, ECO:0000269|PubMed:8611497, ECO:0000269|PubMed:8611559, ECO:0000269|PubMed:8931134, ECO:0000269|PubMed:9174344, ECO:0000269|PubMed:9271498, ECO:0000269|PubMed:9271499, ECO:0000269|PubMed:9708982
ChainResidueDetails
ATYR11
BASP58
BPHE80
BASN99
BLYS153
BPHE178
AASP31
AASP58
APHE80
AASN99
ALYS153
APHE178
BTYR11
BASP31

site_idSWS_FT_FI3
Number of Residues16
DetailsBINDING:
ChainResidueDetails
ASER124
BTYR149
BASN179
BASN199
BALA216
BARG231
BARG292
BTYR299
ATYR149
AASN179
AASN199
AALA216
AARG231
AARG292
ATYR299
BSER124

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
ATYR149
ASER124
ALYS153

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
BTYR149
BSER124
BLYS153

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
AASN100
ATHR126
ATYR149
ALYS153

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
BASN100
BTHR126
BTYR149
BLYS153

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
AGLN146
ALYS153

site_idCSA6
Number of Residues2
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
BGLN146
BLYS153

site_idCSA7
Number of Residues2
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
ATYR149
ALYS153

site_idCSA8
Number of Residues2
DetailsAnnotated By Reference To The Literature 1eq2
ChainResidueDetails
BTYR149
BLYS153

site_idMCSA1
Number of Residues3
DetailsM-CSA 188
ChainResidueDetails
ASER124activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
ATYR149hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
ALYS153activator, hydrogen bond donor

site_idMCSA2
Number of Residues3
DetailsM-CSA 188
ChainResidueDetails
BSER124activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BTYR149hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BLYS153activator, hydrogen bond donor

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PDB entries from 2024-10-30

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