Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2RDF

Crystal Structure of staphyloccocal nuclease VIAGAN/E75A variant at cryogenic temperature

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004518molecular_functionnuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 250
ChainResidue
AARG35
ALYS70
ALYS71
ATYR85
AARG87

Functional Information from PROSITE/UniProt
site_idPS01284
Number of Residues11
DetailsTNASE_2 Thermonuclease family signature 2. DKYGRgLAyIY
ChainResidueDetails
AASP83-TYR93

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: ACT_SITE => ECO:0000269|PubMed:288045
ChainResidueDetails
AARG35
AGLU43
AARG87

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING:
ChainResidueDetails
AASN21
AASP40
AILE41

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a2t
ChainResidueDetails
AARG35
AARG87

site_idMCSA1
Number of Residues6
DetailsM-CSA 165
ChainResidueDetails
AASN21metal ligand
AARG35electrostatic stabiliser, hydrogen bond donor
AASP40metal ligand
AILE41metal ligand
AGLU43hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AARG87electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon